Sulfurimicrobium lacus skT11: SKTS_00180
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Entry
SKTS_00180 CDS
T06796
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
slac
Sulfurimicrobium lacus skT11
Pathway
slac03030
DNA replication
slac03410
Base excision repair
slac03420
Nucleotide excision repair
slac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SKTS_00180 (polA)
03410 Base excision repair
SKTS_00180 (polA)
03420 Nucleotide excision repair
SKTS_00180 (polA)
03440 Homologous recombination
SKTS_00180 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slac03032
]
SKTS_00180 (polA)
03400 DNA repair and recombination proteins [BR:
slac03400
]
SKTS_00180 (polA)
Enzymes [BR:
slac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SKTS_00180 (polA)
DNA replication proteins [BR:
slac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SKTS_00180 (polA)
DNA repair and recombination proteins [BR:
slac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SKTS_00180 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SKTS_00180 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
BCB25132
UniProt:
A0A6F8V838
LinkDB
All DBs
Position
complement(21648..24341)
Genome browser
AA seq
897 aa
AA seq
DB search
MKTLLLVDASSYLYRAFHALPDLRNRHNEPTGAIYGVLNMLRRLHQDYQADYSACVFDAK
GKTFRDELYPDYKGRRPPMPPDLAAQIEPLHAAIRAMGWPLLAVEGVEADDVIGTLSRLA
TEEGMRAVISTGDKDMAQLVNRHVSLINTMSNETLDESGVETKFGVPPARIVDYLTLIGD
SADNVPGVAKVGPKTAVKWLSQYQTLDNLVAHAQEVGGAVGENLRNTLDWLPKARELLTI
RCAVPLPVSLQQLTAGPQDNARLRELYERLEFKTWLRELPAVGAHEPAPVVPVERPEPRY
ETILDQSHLEHWLTRLEQAELVSLDTETTGLEPMQSRLVGISFAIEPHHAAYLPLAHHYA
GVPPQLDFATTLQRLKPLLENPAKPKLGQNLKYDSHIFANHGIALRGIVHDTLLQSYVLE
SHKTHDMDALASRHLGVKTISYAEVTGKGAKQIGFDEVALDTATTYAAEDTDITLQLHHN
LYPQISANARLEFIYREIEVPVSQVLFHVERNGVLIDSKLLAEQSRTLGEKMLTLEQRAY
ELAGQPFNLNSPKQIQEILFGQLGLPVKKKTPGGAPSTDEDVLQQLALDYPLPKILLDYR
GLAKLKSTYTDKLPRMVDPATGRVHTSYNQAVAVTGRLASSDPNLQNIPVRSEEGRRIRE
AFIAPPGSRIVSADYSQIELRIMAHLSGDANLLRAFAAGEDIHRATAAEIFACTPLEVTS
EQRRYAKVINFGLIYGMSAFGLASQLNIERGAAQAYMERYFERYPGVAKYMERTRDMAKQ
QGYVETVFGRRLWLPEINAANGQRRQAAERAAINAPMQGTAADLIKLAMIAVHRWLQEEK
MQTLLVMQVHDELVLEVPQGELAQVRRELPRLMAGVARLAVPLVAEVGEGANWEQAH
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacactattgttggtcgacgcttcttcctatctttatcgcgccttccacgctctt
cccgatctgcgcaaccgccacaacgagccgaccggcgccatctacggcgtactcaacatg
ttgcgccgcctgcatcaggattaccaggcggattatagcgcctgcgtgttcgacgcaaaa
ggcaagaccttccgcgacgaactctatcccgactacaaggggcgccgcccccccatgccg
cccgacctcgccgcgcagatcgaaccgctgcacgccgccatccgcgccatgggctggccg
ctgctggcagtggaaggcgtggaagcggacgatgtcatcggcacgctatccaggctcgcg
acggaggaggggatgcgcgccgtgatttccaccggggacaaggatatggcccaactggtg
aaccggcacgtcagcctgatcaacaccatgtccaacgaaacgctggacgaatccggcgtc
gaaacgaaattcggcgtgcccccggcgcgcatcgtcgactacctgaccctgatcggcgac
agcgcggacaatgtcccgggcgtggccaaggtcggccccaagaccgccgtaaaatggctg
agccagtaccagaccctcgacaacctggtggcccacgcccaggaagtcggcggcgctgtc
ggcgagaatctgcgcaatacgctggactggctgcccaaggcgcgcgaactgctcaccatc
cgctgcgccgtccccctgccggtcagcctgcagcagctgaccgcgggaccgcaagacaac
gcccggctacgcgaactgtacgagcgcctcgaattcaagacctggctgcgcgagctgccg
gccgtcggcgctcacgaacccgccccggtcgttccagtggagcgccccgagccccgctat
gaaaccatcctcgaccaaagtcacctggaacactggctgacccgcctggagcaggccgaa
ctggtcagcctcgacaccgaaaccaccggcctcgagcccatgcaatccagactggtgggc
atctcctttgccatcgaaccgcatcacgcggcctacctgcccctggcgcaccattatgcc
ggggtgccgccacagctggacttcgcaacaacgctgcaacgcctcaagccgttgctggaa
aaccccgccaagccaaagctggggcaaaacctcaagtacgacagccatattttcgctaac
cacggcatcgccctgcggggcatcgtccacgacacgctgctgcaatcctacgtgctggaa
agccataaaacgcatgacatggatgcgctcgcctcacgccacctcggcgtcaagacgata
agctacgccgaagtcaccggcaagggggcaaaacagatcggcttcgacgaggtggcgctc
gacaccgcgacgacctatgccgcggaagacaccgacatcaccctgcaactgcatcacaac
ctgtacccccagatcagcgccaacgcccgtctggaattcatttaccgcgagatcgaagtg
ccggtttcgcaggtattgtttcacgtggaacgcaacggtgtgctgatcgacagcaagctg
ctcgccgaacagagccgcacgctgggcgaaaaaatgttgaccctggaacagcgggcgtac
gaactggcgggacagcctttcaacctcaactccccgaaacagatccaggaaatcctgttc
ggccagcttgggctgccggtcaagaaaaaaacccccggcggcgctccctccacggacgag
gacgtgctgcagcaactggcgctggattacccgctgccgaaaatcctgctcgactaccgc
ggcctggccaagctgaaatccacctacaccgacaaacttccgcgcatggtggaccccgcc
accggccgggtgcacaccagctacaatcaggccgtggcggtgaccggacggctggcctcc
tcggaccccaacctgcagaacatcccggtacgcagcgaggagggacggcgcatccgcgag
gcctttatcgccccgcccggaagcagaatcgtgtccgccgactattcccagatcgagctg
cgcatcatggcccacctctcgggagacgccaacctgctgcgcgccttcgcggccggggag
gacatccaccgcgccactgcggcggagatttttgcctgcacgccgctggaagtgacctcg
gaacagcgacgctacgccaaggtgatcaactttggcctgatttacggcatgtcggcattc
ggcctggccagccagctcaatatcgaacgcggcgcggcgcaggcctacatggagcgctac
ttcgagcgctaccccggcgttgccaaatacatggaacgcacccgcgacatggcgaaacag
cagggctacgtggagaccgtattcggccgccgcttatggctgccggagatcaacgccgcc
aacggccagcgccgccaggccgccgagcgcgccgcgatcaatgcgccgatgcagggcacg
gccgccgacctgatcaagctggcgatgatcgccgtccaccgctggctgcaggaggagaag
atgcagaccttgctggtgatgcaggtgcatgacgaactggtgctggaagtgccgcaggga
gaattggcccaggtccggcgcgagctgccgcgcctcatggccggcgtcgccaggctggcg
gtcccgctggtcgccgaggtaggcgagggggcgaactgggaacaggcgcactag
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