Sulfurimicrobium lacus skT11: SKTS_00230
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Entry
SKTS_00230 CDS
T06796
Symbol
uvrD
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
slac
Sulfurimicrobium lacus skT11
Pathway
slac03420
Nucleotide excision repair
slac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SKTS_00230 (uvrD)
03430 Mismatch repair
SKTS_00230 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slac03400
]
SKTS_00230 (uvrD)
Enzymes [BR:
slac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SKTS_00230 (uvrD)
DNA repair and recombination proteins [BR:
slac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SKTS_00230 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
SKTS_00230 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
DUF8203
WHD_MCM8
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BCB25137
UniProt:
A0A6F8V7P6
LinkDB
All DBs
Position
complement(27275..29419)
Genome browser
AA seq
714 aa
AA seq
DB search
MTTPLLRGLNPEQLAAVTLPHESALILAGAGSGKTRVLTTRIAHLIQSGLASPSGIFAVT
FTNKAAKEMLARLAALLPINTRGMWIGTFHGLANRMLRAHHREAGLPALFQILDSADQLG
AIKRLLKALNVDDEKYPPKQLQHFINGCKEEGLRAHMVEAFDPYSRKQRELYAAYDEQCQ
REGVVDFAELLLRSYELLQRETALRQHYQSRFRHILVDEFQDTNHLQYQWLKLLAGEQAA
VFAVGDDDQSIYAFRGARVGNMADFERDFQVEKVIRLEQNYRSHGNILDAANALIRHNQS
RLGKNLWTAEGSGEPIRVFEAHSDYEEAGFIVDEVKALQREGVPLSGIALLYRSNAQSRV
LEHALFNAAVPYRVYGGLRFFERQEIKHALAYLRLIGNSNDDGALLRVINFPTRGIGARS
LESLQEIARSEGISLWQAAQLKRMSGKAGATISAFTALIESMRETCAALPLPEQVEHMLD
HSGLVAHYKSEKEGADRLENLNELINAAAGFELEHSAEDVDGAPDALTAFLTHASLEAGE
HQAEAGQEALQLMTVHAAKGLEFHAVFISGLEEGLFPHENAAKERDGVEEERRLMYVAIT
RARRRLYISFADSRMLHGQLRYGIASRFLEELPPQLLKRINHSGAAQPMQQPAASSAATG
ASGWHIGQAVSHPKFGPGIIINSEGRGADARVQVSFSHAGVKWLALEYAKLEAS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaccacacccttgctacgcggactcaacccggaacagctcgccgccgttaccctgccc
catgaatccgcgctgatcctggctggcgccggcagcggcaagacgcgggtgctcaccacc
cgcatcgcccacctgatccagtccggcctggccagccccagcggcattttcgccgtcacc
ttcaccaacaaggcggccaaggaaatgctcgcgcgcctcgcggcgctgctgccgatcaac
acgcgcggcatgtggatcggcacctttcacggcctggccaaccgcatgctgcgcgcacac
caccgcgaagccgggttgccggccctgttccagatcctcgactcggccgaccagctgggc
gccatcaagcgcctgctcaaggcgctcaacgtggacgacgagaaatacccgcccaagcag
ttgcagcatttcatcaacggctgcaaggaagaggggctgcgcgcccacatggtcgaggct
ttcgacccctactcgcgcaagcagcgggagctctatgccgcctacgacgagcaatgccag
cgcgagggggtagtcgatttcgccgaactgctgctgcgcagctacgagctgctgcagcgt
gaaaccgccttgcgccagcactaccagagccgtttccgccacatcctggtagacgaattc
caggacaccaaccacctgcaataccagtggctcaagctgctggcgggggaacaagccgcg
gtgttcgcggtaggcgacgacgaccagtcgatctatgccttccgcggcgcgcgcgtgggc
aacatggccgatttcgagcgcgatttccaggtcgaaaaagtgattcgcctggagcagaac
taccgctcgcacggcaacattctcgacgccgccaacgcactgatccgccacaaccagagc
cgcctgggcaagaacctgtggacggcggagggttcaggcgagccgatccgcgtcttcgag
gcccactccgactacgaggaagccggcttcatcgtggacgaggtgaaagccttgcagcgc
gaaggcgttccgctctccggcatcgccctgctgtatcgctccaacgcgcaatcgcgcgtg
ctggaacacgccttgttcaacgccgcggtgccgtaccgcgtctacggcgggctgcgcttc
ttcgagcgccaggaaatcaagcacgcgctggcttacctgcgcctgatcggcaactcgaac
gacgacggcgcattgctccgggtgatcaattttcctacccgcggcatcggcgcgcgcagc
ctggagtccttgcaggaaatcgcccgcagcgaaggtatcagcctgtggcaggcggcgcag
ctcaagcgcatgagcggcaaggccggcgccaccatcagcgcgttcaccgcgttgatcgaa
agcatgcgcgaaacatgcgcggcgctgcccctgcctgagcaggtcgagcacatgctggac
cacagcggcctggtcgcgcattacaaaagcgagaaggagggcgccgaccgcctggaaaac
ctcaacgaactgatcaacgccgcggccggattcgagctcgaacactcggcggaagacgtg
gatggggcgcccgacgcgctcaccgcattcctgacgcatgcctcgctcgaagccggcgaa
caccaggcggaggcggggcaggaagcgctgcagctgatgaccgtgcatgccgcaaagggt
ctggagtttcatgccgtgttcatcagcgggctggaagaagggctgttcccgcacgagaat
gccgccaaggagcgcgacggcgtggaagaagaacggcgcctgatgtacgtcgccatcacc
cgcgcacggcggcggctgtatatcagctttgccgacagccggatgctgcatggacagctg
cgctatggcatcgcctcgcgcttcctggaagagctgccgccgcaattgctcaaacgcatc
aaccacagcggggcagcgcaacccatgcagcagccggcagcgagcagcgctgcgactggc
gcatcgggctggcatatcggccaggcggtttcccaccccaagttcgggccgggcatcatc
atcaacagcgaggggcgcggcgcggatgcgcgagtgcaggtgagcttcagccacgccggt
gtgaaatggctggcgctggagtacgccaagctggaagcttcttaa
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