Sulfurimicrobium lacus skT11: SKTS_04770
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Entry
SKTS_04770 CDS
T06796
Symbol
hupB_1
Name
(GenBank) DNA-binding protein HU-alpha
KO
K03530
DNA-binding protein HU-beta
Organism
slac
Sulfurimicrobium lacus skT11
Brite
KEGG Orthology (KO) [BR:
slac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slac03032
]
SKTS_04770 (hupB_1)
03036 Chromosome and associated proteins [BR:
slac03036
]
SKTS_04770 (hupB_1)
03400 DNA repair and recombination proteins [BR:
slac03400
]
SKTS_04770 (hupB_1)
DNA replication proteins [BR:
slac03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SKTS_04770 (hupB_1)
Chromosome and associated proteins [BR:
slac03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SKTS_04770 (hupB_1)
DNA repair and recombination proteins [BR:
slac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SKTS_04770 (hupB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF937
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
BCB25591
UniProt:
A0A6F8V8Y2
LinkDB
All DBs
Position
495685..495981
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AA seq
98 aa
AA seq
DB search
MNKSELIDSVAGKTGVSKAKTAEVLDALMATVKESMAKSEPVQLIGFGTFEVTERAAREG
RNPATGAAMKIAAKKVVKFKVGKALADVVAAAKPAKKK
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaagcgaactgatcgattccgttgcaggcaagaccggtgtttccaaagccaaa
accgccgaagtgctggatgcgctgatggctacggtcaaggaaagcatggccaagagcgag
ccagtgcaactgatcggtttcggcactttcgaagtgaccgagcgtgctgcgcgcgaaggc
cgcaacccggcgaccggtgcagcgatgaagatcgccgccaagaaagtggttaagttcaag
gtcggcaaggcgctggccgatgttgttgccgctgcgaagcccgccaagaagaagtaa
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