KEGG   Sulfurimicrobium lacus skT11: SKTS_04870
Entry
SKTS_04870        CDS       T06796                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
slac  Sulfurimicrobium lacus skT11
Pathway
slac00740  Riboflavin metabolism
slac01100  Metabolic pathways
slac01110  Biosynthesis of secondary metabolites
slac01240  Biosynthesis of cofactors
slac02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:slac00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    SKTS_04870 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SKTS_04870 (ribD)
Enzymes [BR:slac01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     SKTS_04870 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     SKTS_04870 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Mmc1_N
Other DBs
NCBI-ProteinID: BCB25601
UniProt: A0A6F8V8Z3
LinkDB
Position
504638..505732
AA seq 364 aa
MFTSADHAFMASAMQLAQRGLYSTTPNPRVGCVIVQAGKVVGEGWHERAGEPHAEVHALN
QAGEAARGATVYVTLEPCSHYGRTPPCAGALIKAGVGRVVVAMRDPNPMVAGQGIAMLEL
AGIPTTCGVLEKEARELNLGFISRMERGRPWLRLKAAATLDGKTALNNGVSQWITGPDAR
RDAHRLRARSCAMLTGIGTVLADDPSFTVRDVETTRQPLKVVVDANLSMPLDAKILQGAK
LLVATGCDEEERIRQLQDAGAEVLVLPAEHGQIDLARLLQELGRRGMNEITVEAGKVLNG
ALLSAGVVDELVFYLAPMLFGDKARGMFGVPEIEEMNQRQELEIRDLRMVGRDMRIVATL
KRKA
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgtttacttccgccgaccacgcatttatggcgtcagccatgcaactggcgcagcgcggc
ctgtacagcaccacccccaatccccgcgtgggctgtgtcatcgtgcaagctggaaaggtg
gtgggcgagggctggcatgagcgggccggcgagccccatgccgaggttcatgcgttgaac
caggcgggagaggcagcgcggggcgcgacggtttatgtcacgctcgagccgtgcagccac
tacggccgcaccccgccctgtgccggggcgctgatcaaggcgggcgtgggacgcgtggtg
gtggcgatgcgcgaccccaatcccatggtggccggacagggtatcgccatgctcgaactg
gcgggtattcccaccacttgcggcgtgctggaaaaggaagcgcgcgagctgaatctcggt
ttcatctcgcgcatggaacggggccggccgtggttgcggctcaaggcggcggccacgctg
gacggtaaaacggcgctgaacaacggcgtcagccaatggattaccggccccgacgcgcgg
cgtgacgcgcaccgtttgcgcgcacgttcttgcgccatgctgaccggcatcggcacggtg
ctggcagacgatccatcttttacggtgcgcgatgtcgagacgacgcgccagccgctcaag
gtggtggtggacgccaacctgagcatgccgctggatgcgaaaatattgcagggtgccaag
ctactggttgccaccggctgcgacgaggaagagcgtatccggcaactgcaggatgccggc
gccgaggtgctggtgttgccggccgagcacgggcagatcgacctggcgcgcctgctgcag
gaactggggcggcgcggcatgaacgaaatcacggtggaagccggcaaggtgctcaatggc
gccttgttgagtgccggcgtcgtggacgaactggtgttctacctcgcgcccatgctgttc
ggcgacaaggcgcgcggcatgttcggcgtgccggaaatagaggaaatgaatcagcgtcag
gagttggaaatcagggatctgcgcatggtgggacgcgatatgcgcatcgtggcaacattg
aaaaggaaagcataa

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