Sulfurimicrobium lacus skT11: SKTS_04980
Help
Entry
SKTS_04980 CDS
T06796
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
slac
Sulfurimicrobium lacus skT11
Pathway
slac00061
Fatty acid biosynthesis
slac00071
Fatty acid degradation
slac01100
Metabolic pathways
slac01212
Fatty acid metabolism
slac02024
Quorum sensing
slac04146
Peroxisome
Module
slac_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
slac00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SKTS_04980
00071 Fatty acid degradation
SKTS_04980
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SKTS_04980
09145 Cellular community - prokaryotes
02024 Quorum sensing
SKTS_04980
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
slac01004
]
SKTS_04980
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slac04147
]
SKTS_04980
Enzymes [BR:
slac01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SKTS_04980
Lipid biosynthesis proteins [BR:
slac01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SKTS_04980
Exosome [BR:
slac04147
]
Exosomal proteins
Exosomal proteins of breast milk
SKTS_04980
Exosomal proteins of breast cancer cells
SKTS_04980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BCB25612
UniProt:
A0A6F8V9G5
LinkDB
All DBs
Position
514712..516364
Genome browser
AA seq
550 aa
AA seq
DB search
MTNLAQLLAQHLSAPERVLYSQFVDGEWRDYSVLDVVRLAARWQQALRRDGLQAGERVAI
CLRNSVNWVAVDMAALGLGLVVVPLYVDDNPENIAWCLQNSGARLVVMENSRQRAALQAA
MQAPSSALPRIICLQDGPGACDLADWLPADAAAFEVRPLEPGTLATIVYTSGTSGRPKGV
MLSHRNILANVAASSDVVRLRGADSLLSVLPLSHMFERTCGYYLPLSVGIKVAYARGIQQ
IAEDLAFHRPTVLIAVPRVFERFLARLEKTLAQNALKRVLFRLTVHLGWRRFKRQATLAE
RGLYRLLQRFVAAPILERLGGRLCLAVVGGAKVELRIARTFIGLGLNLIQGYGLTEAAPV
VAANREEDNDPATVGAPLKGIETRINEAGELLVRGPSVMLGYWQNPEASAAVMDTEGWLN
TGDLAAFSAGKIVIRGRSKDVLILSSGEKAPPQDIEIAILDDPVFEQAMLLGEGKAFFSL
LAVTAETDDKMLVRRANAQLKSFPRYIRVRRVIPLSEPWTVENGLLTPTQKVKREAVLER
FGALIEEVYR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatctcgctcaactgctcgcacaacatctttccgctccggagcgggtcctctat
agccagttcgtggacggcgagtggcgcgattattcggtactcgatgtcgtccgcctagcc
gcgcgctggcaacaggccttgcgccgcgatgggctgcaggcgggggagcgggtggcgatc
tgtctgaggaacagcgtgaactgggtggcggtcgatatggcggcactgggcctcggtctg
gtggtggtgccgctgtatgtcgatgacaacccggaaaacatcgcctggtgcctgcagaat
tccggcgcccggctggtggtgatggaaaattcccgtcagcgcgcagcgttgcaggccgca
atgcaagctccatcgtctgccttgccgcgcatcatttgcctgcaggacgggcccggcgcg
tgcgatctggcagactggctgccggctgacgcggcggctttcgaggtccggccgcttgag
cccggcacgctggctaccatcgtctacacctccggcacttccggtcgccccaagggcgtg
atgctgtcccaccgcaacatcctcgccaatgtggcggcttccagcgacgtggtgcgcttg
cgcggcgccgacagcctgctttcggtgctgcccctgtcgcacatgttcgagcgtacttgc
ggctactatctgccgctctcggtcgggatcaaggtggcctatgcgcggggtatccagcaa
atcgccgaggatctcgccttccaccggccgaccgtgctgatcgcggtgccgcgcgtgttc
gaacgcttcctcgcgcggctggaaaaaaccctggcgcagaatgcgttgaaacgcgttttg
tttcgcctcaccgtccatcttggctggcgtcgcttcaagcgccaggccacgctggcggaa
cgcgggctctaccggctgctgcagcgcttcgtcgccgcgccgattctcgaacggctgggc
ggccgcctgtgccttgcggtggtgggcggcgccaaggtggagttgcgtatcgcccgcact
ttcatcggtcttgggctcaacctgatccagggctacggactgaccgaggccgcgccggtg
gtggccgcgaaccgcgaggaggacaatgaccctgccaccgtcggcgcgccgctcaagggt
atcgaaacccgcatcaacgaagccggggagctgctggtgcgcggtccctccgtgatgctc
gggtattggcagaacccggaggccagcgcagcggtgatggataccgaaggctggctcaat
accggcgacctggccgcgttcagcgcgggcaagattgtcattcgggggcgcagcaaggac
gtcctgatcttgtccagcggtgagaaagcgccgccgcaggacatcgaaatcgcgattctc
gacgatcccgttttcgaacaggcgatgctgctcggggagggcaaggcttttttctccttg
ctggccgtcaccgccgagactgacgacaagatgctggtgcggcgcgccaatgcgcagctc
aagtctttcccgcgctatatccgggtgcgccgcgtgattccgttaagcgagccgtggacg
gtggagaacggattgcttacgccgacccagaaggtcaagcgcgaggctgtgctggagcgt
ttcggtgcgttgattgaagaggtttaccgttag
DBGET
integrated database retrieval system
