Sulfurimicrobium lacus skT11: SKTS_06020
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Entry
SKTS_06020 CDS
T06796
Name
(GenBank) hypothetical protein
KO
K10979
DNA end-binding protein Ku
Organism
slac
Sulfurimicrobium lacus skT11
Pathway
slac03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
slac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SKTS_06020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slac03400
]
SKTS_06020
DNA repair and recombination proteins [BR:
slac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SKTS_06020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
IL28A
Motif
Other DBs
NCBI-ProteinID:
BCB25716
UniProt:
A0A6F8V9P0
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All DBs
Position
611568..612452
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AA seq
294 aa
AA seq
DB search
MNEDNDTNQVEEAEEEQPHAMWSGIIAFGLVSLPVSLFPAQRGKVALKMVDPEGTLLKRQ
FFCADDNRALERDDIVRSYEIEKYHYVVVEDEELEALEPKKSREIDLKRFVPLGAINPVY
FERAYFLVPDSDTTKAYRLLAKSMEDEQKAGIATFVMRGKDYLVAIIAEGGILRAETLRF
HDELRTPEQVGLPRRQAGDKEVTEKMRAAIGKLTRQHFDAELLSDPHVKSLQQHIAEKLK
SGTDVLHAPAEPEAAEAESNVIDLMQVLKERLQGRAPQPAKPQPAANRGKPRGR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagacaacgacaccaatcaggtagaggaagcagaagaggaacagccccacgcc
atgtggtcgggaatcatcgccttcggcctggtaagcctgccggtaagcctgttccccgcc
cagcgcggaaaggtcgccctgaaaatggtcgatccggaggggacgctgctcaagcggcaa
ttcttctgtgccgatgacaaccgggcgctggaacgggacgatatcgtgcgcagttacgag
atcgagaagtaccactacgtggtagtcgaagatgaagagctggaagcgctggagccgaag
aagtcgcgcgagatcgacctgaaacggtttgtgcccctcggtgctatcaatccggtctac
ttcgaacgcgcctattttctggtccccgacagcgataccaccaaggcctaccgcctgctg
gccaagagcatggaagacgagcagaaggccggcatcgccacctttgtgatgcggggcaag
gattacctggtggccatcatcgccgaggggggcatcctgcgtgcggagacgctgcgcttt
cacgatgaattgcgcacgcccgagcaggtcgggctgccccggcgacaagccggcgacaag
gaggttaccgaaaagatgcgcgcagccatcggcaagttgacgcgccagcatttcgacgcc
gaactcctgagcgacccgcacgtgaagagccttcagcagcacatcgcggagaagctcaaa
tccggcaccgacgtgctgcatgcgcctgcggaacccgaagccgccgaggccgaaagcaac
gtgatcgacctcatgcaggtgctcaaggaacgtctgcaggggagggcgccccaacccgcg
aaaccgcagcctgctgcgaaccgggggaagccgcgcgggcggtga
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