Sulfurimicrobium lacus skT11: SKTS_07830
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Entry
SKTS_07830 CDS
T06796
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
slac
Sulfurimicrobium lacus skT11
Brite
KEGG Orthology (KO) [BR:
slac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slac03016
]
SKTS_07830
Enzymes [BR:
slac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SKTS_07830
Transfer RNA biogenesis [BR:
slac03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SKTS_07830
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Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
CPDase
Barttin
Motif
Other DBs
NCBI-ProteinID:
BCB25897
UniProt:
A0A6F8V9V7
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All DBs
Position
788640..789176
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AA seq
178 aa
AA seq
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MRGEGQARLFFALWPDAAVCGALDQAGRKLRDACGGRQMRCNNIHLTLVFLGNVEITRID
ALRAVGDGVALPPFVMTLNQLGWWRHNRVAWAAPDTTPGPLLALVNQLQDGLRVAAFAFD
DRPVYAPHVTLLRNARCEKAEWPAFESQEWVANEFVLVRSVTREEGATYEAIGRWSLG
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
gtgaggggtgaggggcaggcgcggctgtttttcgccttgtggccggacgccgcggtgtgc
ggcgcgctagaccaggcgggccgcaagctgcgcgatgcgtgcggcgggcggcagatgcgg
tgcaacaacatccacctcacgctggtgtttctcggcaacgtggaaatcaccaggatcgac
gccttgcgcgcggtgggagatggcgttgcgctgccgcctttcgtcatgaccctgaaccag
cttggctggtggcgccacaaccgggtggcctgggctgcgccggacacaacgcccgggccg
ttgctggcgctggtgaatcagttgcaggacgggctgcgcgttgctgctttcgcctttgat
gaccgccccgtttatgcacctcatgtcacgctgctgcgcaatgcgcgctgcgaaaaagcg
gaatggccggcgtttgaatcccaggaatgggtcgccaatgagttcgtgctggtgcgttcg
gtaacgcgggaggaaggggcgacctatgaggctataggtcgctggtctttaggttga
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