Sulfurimicrobium lacus skT11: SKTS_12390
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Entry
SKTS_12390 CDS
T06796
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
slac
Sulfurimicrobium lacus skT11
Brite
KEGG Orthology (KO) [BR:
slac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slac03400
]
SKTS_12390
Enzymes [BR:
slac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SKTS_12390
DNA repair and recombination proteins [BR:
slac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SKTS_12390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DUF2785
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BCB26353
UniProt:
A0A6F8V938
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All DBs
Position
1256437..1259721
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AA seq
1094 aa
AA seq
DB search
MHEFDYHTALNPERSVVIEACAGSGKTWLLVSRILRLLLAGAEPGEILAITFTRKAAQEM
QARLLEWLRLLALQPEDEAREFLRQRALSDSEIEQLLPHARNLLERVLTAEPTLTINTFH
GWFLQLLQKAPLEGGAVGNFSLLDQTSALLEEAWQSFAEDLAEQEEDPTASALQELFRGH
GLFNTRALLLGFVAKRAEWWAYTAGQADPLAYALERLRRELDVDPEQDVLAEMQQDPVLA
EWHSEYAQLLGKNTATDQKLAAQLVDALALKDLDQRFATLCPVYFTKSGTPRVRASSPTQ
AKRLGAHGEARLIELHQMMCDLLYEARDRLTAQAVYRFNCIGLRCGAALLDAYQRLKEAR
QMLDFADVEWRVFQLLSRSDYAEYMQYKLDSRYSHILLDEFQDTNPLQWQVMQAWLGAYG
AVGSRPSVFLVGDPKQSIYRFRRAEPRLFQIAAASLMRDFAAARLEQDRSRRSAPAVIQA
VNRVFAAQPDFAGFREHGWHHDTQEGAVALLPLAEKPAQAEEEGADDTVPMLRNPLQQAR
QEDEDVRHEQEAAQLAEKITAIVGRWQVDDEKRGPRPADYRDIMLLVRSRTWLATYERAL
RAARIPYLSSRQGGLLDTLECSDLAALLEFLVTPFADLKLAQVLRSPVFGCDDSDLMRLA
RGEESSWWQRLKALPEELLTAPLKLALERLAAWQEIADRLPVHDLLDRIYFEGEVLQRYR
MAVPQAMVAAVQANLHAFIELALNMDSGRYPSLARFIDEVAALRRAPEQESPDEGLIGDG
GNALRILTVHGAKGLEAPIVWLLDANAAPRNESGYRILVDWPPEDVAPRHFSLVSRKAEL
ARAREHYVEAEAAHARRENLNLLYVAMTRAKQALIVSGSTSGKGGESWYQKIQAGLQDSG
LGVGLSPAAVPPAFDMEEKPSVALEQNNLPVPPTGRREPFSRLDPARHHGIQLHALLEWV
DMGRDLPEQKEPLQARLGLEEAEFAPLWAEALELLRAPVLQRFFDRAQYQAAWNELGYQG
GDGEVRRIDRLVEFADCVWVLDYKTGGGAVDDPDVLAAPYRGQMNEYRRAMESVFPGKPV
RCALVFPGPTLVEV
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaattcgactaccacaccgcactgaatcccgagcgctcggtggtgatcgaagcc
tgcgccggcagcggcaagacctggctgctggtgtcgcgcatcctgcgcctgctgctggcg
ggtgccgagccgggcgaaatcctcgccatcactttcacgcgcaaggccgcccaggagatg
caggcgcgcctgctggagtggctgcgcctgctggccctgcagccggaagatgaggcacgc
gaatttctgcgccagcgtgccttgtcggacagcgaaatcgaacaattgctgccgcacgcg
cgcaacctgctggaacgcgtgctgactgccgagccgacactcaccatcaacactttccac
ggctggttcctgcagctgctgcaaaaggcgccgctcgaaggcggcgcggtgggcaatttt
tccctgctcgaccagacctcggccttgctggaagaggcgtggcagagttttgccgaggac
ctcgccgagcaagaggaagacccgaccgccagcgctctgcaggagctgttccgcggccat
gggctgttcaatacccgcgccctgctgctggggttcgtcgccaagcgcgcggagtggtgg
gcttacaccgcagggcaggccgatcccctggcctatgccctggaacgcttgcgccgcgaa
ctggacgtcgatccggaacaggacgtgctggcggaaatgcagcaggaccccgtgttggcc
gaatggcacagcgaatacgcgcagctcctggggaagaacaccgcgaccgaccagaaactc
gcggcccaactggtggatgcgctggcgttgaaggatcttgaccagcgtttcgccacgctg
tgcccggtgtacttcaccaagagcggtacgccgcgcgttcgcgcctcttcgccaacccag
gccaagcggctgggcgcgcatggcgaagcgcgcctgatcgaattgcaccagatgatgtgc
gacctgctgtatgaagcccgcgaccgcctcaccgcccaggccgtgtaccgcttcaattgc
atcggcctgcgctgcggcgcggcgctgctcgacgcctaccagcgtctcaaggaagcgcgc
cagatgctggatttcgccgatgtcgaatggcgcgtgttccagctgctgagccgcagcgat
tacgccgagtacatgcagtacaagctggacagccgctacagccatatcctgctggacgag
ttccaggacaccaaccccctgcagtggcaggtgatgcaggcctggctgggcgcttacggc
gcggtgggcagccgccccagcgtgttcctcgtgggcgaccccaagcagtcgatctaccgc
ttccgccgcgccgaaccgcgcctgttccagatcgccgccgcgagcctgatgcgcgatttc
gctgccgcccggctggaacaggaccgctcgcggcgcagcgcgccggcggtcatccaggcg
gtgaaccgggtgttcgccgcgcagccggacttcgcgggttttcgcgagcatggctggcac
cacgacacgcaggagggcgccgtcgcgctgctgccgctggcggagaaaccagcccaggcc
gaagaagagggcgccgacgacaccgtgccgatgttgcgcaatccgctccagcaggcgcgt
caggaagacgaggacgtgcgccacgagcaggaggcggcccagctcgcggagaaaatcacc
gccatcgtcggccgctggcaggtggatgacgagaagcgcgggccgcgccccgcggactac
cgcgacatcatgctgctggtccggagccggacctggctcgccacttacgaacgcgctctg
cgcgcggcgcgcatcccctatctcagctcgcgccagggcggcctgctggacacgctggaa
tgcagcgatctggcggccttgctggagtttctcgtgacgccttttgccgaccttaagctg
gcccaggtgctgcgctcgcccgtgttcggctgcgacgatagcgacctgatgcggctggcg
cgcggagaggagagcagctggtggcagcgcctgaaggccctgcccgaggaactgctcact
gcgcccttgaagctggcgctcgaacgcctcgcagcctggcaggaaatcgcggaccgcctg
ccggtgcacgacctgctcgaccgcatctacttcgaaggcgaggtgctgcagcgctatcgc
atggccgtgccgcaagccatggtcgccgcggtgcaggccaatttgcatgccttcatcgag
ctggcgctcaacatggacagcggtcgttatcccagtctggcgcgtttcatcgacgaggtg
gcggccctgcgccgcgcgccggagcaggagtcgccggacgagggcctgatcggcgacggc
ggcaacgcgctgcgcatactcaccgtgcacggcgccaaggggctggaagcgcccatcgtg
tggctgctggacgccaacgccgcgccgcgcaacgaaagcgggtaccggattttggtcgac
tggccgccggaagatgtggcgccgcgccacttctccctggtaagccgcaaggcggagctg
gcacgggcgcgcgaacattacgtggaagcggaagcggcgcacgcccggcgcgagaacctc
aacctgctctacgtcgccatgacgcgcgccaagcaggcgctgatcgtgagcggcagcacg
agcggcaagggcggggaaagctggtaccagaaaatccaggccggtctgcaggacagcgga
ctcggcgttggactttcgcccgccgccgtgccgcctgccttcgatatggaggagaagcca
agcgttgccctcgagcaaaacaacctgccggtgccgccgaccgggcggcgggagcctttc
tcccggctcgaccccgcgcgccatcatggtatccagttgcatgcgctgctggaatgggtg
gacatggggcgtgacctgccggaacagaaagagccgctacaggcccggctcggactcgaa
gaagcggagtttgcgccgctctgggccgaagcgctcgaactgctgcgggcgccggtgctg
cagcggtttttcgatcgggcgcagtatcaggcggcctggaacgaactcggctaccaaggc
ggggacggggaagtgcgccgcatcgatcgcctggtcgagttcgccgactgcgtgtgggtg
ctcgactacaagaccggcggcggggcggtggatgacccggatgtgcttgccgcaccctat
cgcgggcaaatgaacgaataccggcgcgccatggaaagcgtgtttccgggcaagccggtg
cgttgcgccctggtttttcccgggccaacgctcgtcgaggtctag
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