Sulfurimicrobium lacus skT11: SKTS_15880
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Entry
SKTS_15880 CDS
T06796
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
slac
Sulfurimicrobium lacus skT11
Pathway
slac02020
Two-component system
slac02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
slac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SKTS_15880 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SKTS_15880 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slac03021
]
SKTS_15880 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
slac02035
]
SKTS_15880 (fliA)
Transcription machinery [BR:
slac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SKTS_15880 (fliA)
Bacterial motility proteins [BR:
slac02035
]
Flagellar system
Flagellar assembly proteins
Stator
SKTS_15880 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_23
Motif
Other DBs
NCBI-ProteinID:
BCB26702
UniProt:
A0A6F8VCL5
LinkDB
All DBs
Position
1618723..1619445
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AA seq
240 aa
AA seq
DB search
MYQANGKLQNKEQYVVQYAPLVRRIAHHLAAKLPASVEVDDLIQAGLIGLLDAVGHYDQS
QGAQFETYASQRIRGAMLDELREADWAPRSARKCMRTIEAAINRLEQKLGRQPGEQELAS
ELKVPLAEFQQMLQDARGHQLVYYEDYQADGDDDFFERHSADQRPGPLGQIENEDFRAAL
VEAISVLPEREQMVMSLYYEEELNLKEIGAVLGVTESRVSQLHSQAVARLRSRLKDWLGD
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaggctaacggcaaactgcagaacaaggaacaatacgtggtgcagtatgctccg
ctggtcaggcgcatcgcgcaccatctggcggccaagctccccgccagcgtggaggtcgac
gacctgatccaggccggcttgatcggcctgctcgacgctgtcggacactacgatcagtcg
caaggggcacagttcgagacttacgcgtcacagcgcatccgcggcgccatgctggatgag
ctacgcgaagccgactgggcgccacgttcggcgcgcaaatgcatgcgcaccatcgaagcg
gcgataaacaggctggagcaaaagctggggcggcagccgggcgagcaggaactggcgagt
gaattgaaagtaccgctggcggaattccagcagatgctgcaggatgcacgtggtcaccag
ctggtgtactacgaggattatcaggcggatggcgacgacgactttttcgagcgccactcg
gccgaccagcgcccgggcccgcttgggcaaatcgagaacgaagattttcgcgccgcgctg
gtggaggcaatcagcgttttgccggagcgcgagcaaatggtgatgagcctgtattatgaa
gaggagctgaacttgaaagaaatcggtgcagtactgggcgtgaccgagtcccgcgttagc
cagctccatagtcaggctgtcgcacgcctgcgcagccggctcaaggactggctgggcgac
tga
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