Sulfurimicrobium lacus skT11: SKTS_16110
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Entry
SKTS_16110 CDS
T06796
Name
(GenBank) hypothetical protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
slac
Sulfurimicrobium lacus skT11
Brite
KEGG Orthology (KO) [BR:
slac00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
slac01011
]
SKTS_16110
Enzymes [BR:
slac01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
SKTS_16110
Peptidoglycan biosynthesis and degradation proteins [BR:
slac01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
SKTS_16110
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
BCB26725
UniProt:
A0A6F8VD87
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All DBs
Position
complement(1641722..1643503)
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AA seq
593 aa
AA seq
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MRLRAVSFFALSILCLFAANSANAWEAFPAADSWLLQRTQPTAERPSTLDSTTPDDTAST
AVTDSNATRSVSKQPDSSSTESSGTLVVNLRSAEQINSSPASLKLPDFGSDNPDLWERIR
AGFTLGDLDSPLVKEHEAWYAARPEYVGRMMERSQRYLFHIVEEVEKRGMPTEIALLPMI
ESAFNPKAYSTSHAAGIWQFIPSTGKHFGLNQNVLYDGRRDVLAATDAALDYLQKLYNMF
GSWELALAAYNWGEGSVGRAIAKNQAAGEPTDYLSLRMPPETRNYVPKLIAVKNIIMNPT
AYGLSLNSIPNSPYFASVKLKQHMDVALAARLAEVPLDEFVALNPAYNKPLVAGTGTGRP
TLLLPVAKVNSFSLNLENYEHPLSSWQTYTPQHGEKLVAIAKRFGISLARLKELNAISGR
TKLASTQTLLVPITRSGNAPSLAAHIPEAEPVFAPAAPSNKTIYTVAKGDTVLSIAKRHG
ISVAQLKMQNHLKSNRLARGQKLTVLASAKPEKVSISQAKQVREESVKGRRTVLAKASRA
EKHSHYVVKRGDTVFSIARRFNVAVNDLQRWNKLSANYSLQPGNTLTVITRKS
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcgattgcgcgcggtttcattttttgcattatccattctgtgcctgttcgctgcgaat
tcagcgaacgcatgggaagcttttcctgcggcggacagctggctcttgcagcgcacgcag
ccaacagcagaacggccgtcgaccctcgacagcaccacccccgatgacaccgccagcact
gcggttacagatagtaacgccacgcggtccgtctcgaaacaaccagattccagcagcacg
gaaagctccggcaccctggtagtaaatctccgttccgcagagcagatcaattccagcccc
gcatctctcaaattgcccgacttcggcagcgacaaccctgacctctgggagcgcatccgc
gccggcttcacacttggcgacctggacagcccgctggtcaaggagcatgaagcctggtat
gccgcacgacccgaatacgtgggccgcatgatggagcgcagccagcgctacttgttccat
atcgtcgaagaagttgaaaagcgcggcatgccgacagagatcgccctgctacccatgatc
gagagcgcgttcaatccgaaagcctactccaccagccacgccgcgggaatctggcagttc
atcccatctaccggaaaacatttcggcctcaaccagaacgtgctttacgacggtcgccgc
gacgtcctggcagccaccgatgccgctctggactacctgcagaaactgtacaacatgttc
ggcagctgggaactcgccctagccgcctacaactggggtgaaggctcggtaggccgggca
attgccaagaatcaggccgccggcgagcccaccgactatctcagcctgcgcatgcctccg
gaaacgcgcaattacgtacccaagctgatcgccgtcaaaaacatcatcatgaaccccacg
gcatatggcctgtctctcaattcgatccccaacagtccttatttcgccagcgtcaaactc
aagcagcatatggatgtagcgctggcagcccgcctggccgaagttccgctggacgagttc
gtcgccctcaacccggcttacaacaaaccgctcgtggccggcacgggcaccggcagaccc
accctgttgctgccggtagccaaggtcaacagtttttccctgaatctggaaaattacgag
catcccctgtcctcgtggcagacatatacgccacaacatggcgagaagctggttgccatt
gccaaacgcttcgggatttcactcgcgcgcctgaaagaactcaacgccatcagcgggcgc
accaagctggccagcacccaaaccctgctggtacccattaccaggtcgggcaatgcacct
agcctggcggcacatattccagaagccgaacctgtattcgcacctgcagcaccaagcaac
aagacaatttataccgtcgccaagggcgacaccgtgcttagcatcgccaagcgccatggg
atatcggtggcacagctgaaaatgcagaaccatctcaagtccaaccgcttggcacgaggg
caaaaactgaccgtgctggcctccgcaaaacccgaaaaggtgtcgatttcccaggccaaa
caggttcgcgaagagtcggttaaaggtaggcggacagtacttgccaaagcgagccgtgcc
gaaaagcattcccactatgtggtgaaacgcggcgacacggtgttcagcatcgcccggcgc
ttcaatgtggcggtcaacgacctgcaacgctggaacaagctctccgcgaactacagcctg
cagcccggcaacacgctgacggtcatcacccgcaaaagctga
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