Sulfurimicrobium lacus skT11: SKTS_16540
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Entry
SKTS_16540 CDS
T06796
Name
(GenBank) RNA-binding protein S4
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
slac
Sulfurimicrobium lacus skT11
Brite
KEGG Orthology (KO) [BR:
slac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slac03009
]
SKTS_16540
Enzymes [BR:
slac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
SKTS_16540
Ribosome biogenesis [BR:
slac03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SKTS_16540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S4
Motif
Other DBs
NCBI-ProteinID:
BCB26768
UniProt:
A0A6F8VAM9
LinkDB
All DBs
Position
complement(1692561..1693268)
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AA seq
235 aa
AA seq
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MTEPVRLAKRLAAMASCSRREAELYIAGGWVTVDGLVVEEPQFMVSQQKIELHPDASLTT
VEPVTILLHQPPADADAAQQLICAATHAPDDPSGIAVLKRHFVRLTPCAPLQANAGGLAV
FTQDWRVARKLVDDLATVEQEYIVEVTGELGADGLKRLNHGLSFNGRALPPIKVSWQNET
RLRFALKGVQPGQIAHMCRSVGLDVVTMKRIRIGRVSMAKLQPGSWRYLMPHERF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacccgtccgcctcgccaaacgccttgccgcaatggcctcctgctcgcgccgc
gaggccgagctttatatcgccggcggctgggtaacggtcgatgggctggtggtggaagag
ccgcagttcatggtgtcgcagcagaagatcgagctccaccccgacgccagcctcaccacg
gtcgaaccggtgaccatcctgctgcaccagccgccggcggatgccgacgccgcgcagcag
ctgatttgcgccgccacgcacgccccagacgacccttccggcatcgccgtgctcaagcgg
catttcgtgcggctgacgccgtgcgcgccgctgcaggcgaacgccggcggcttggcggtg
tttacccaggactggcgcgtggcgcgcaagctggtcgacgatctcgccacggtcgagcag
gaatatatcgtggaagtcacgggcgagctgggcgcggacgggctcaagcgcctcaaccac
gggctcagcttcaacggccgggcactgcccccgatcaaggtcagctggcaaaacgagacc
cgcctgcgctttgcactcaagggggtgcaacccggccagatcgcgcacatgtgcagaagt
gtcgggctggatgtggtgaccatgaagcgcatccgcatcgggcgcgtttcgatggccaaa
ctgcagccgggttcatggcgctacctgatgccgcacgagcgcttttaa
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