KEGG   Sulfurimicrobium lacus skT11: SKTS_16650
Entry
SKTS_16650        CDS       T06796                                 
Symbol
vapC_3
Name
(GenBank) tRNA(fMet)-specific endonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
slac  Sulfurimicrobium lacus skT11
Brite
KEGG Orthology (KO) [BR:slac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:slac03016]
    SKTS_16650 (vapC_3)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:slac02048]
    SKTS_16650 (vapC_3)
Transfer RNA biogenesis [BR:slac03016]
 Prokaryotic type
  tRNA degradation factors
   SKTS_16650 (vapC_3)
Prokaryotic defense system [BR:slac02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    SKTS_16650 (vapC_3)
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: BCB26779
UniProt: A0A6F8VDG1
LinkDB
Position
complement(1704922..1705323)
AA seq 133 aa
MLHMLDTDTASYIIKGKSPAIEAKLAALVPSMVCISVMTRAELLYGLKRLPADHRLHLAV
RQFLKIVRILPWDAEAADWYAEIRHQLVSTGQPIGELDMMIAAHSLSAGSVLVTNNSRHY
ERIEAPLILANWA
NT seq 402 nt   +upstreamnt  +downstreamnt
atgttgcacatgctggatactgacacggcaagctacattatcaaggggaagtctcccgca
atagaagccaaactggcggcactcgtgccgtcaatggtttgcatctcggtgatgacgcgg
gccgaattgctatacggtttgaaacgcctgcctgccgatcatagactgcacctggcggtg
cgccagttccttaaaattgtccgcatcctgccttgggatgccgaggcagcagactggtat
gccgagattcgccatcaacttgtcagcacaggacaaccgatcggcgaactggacatgatg
atcgctgctcactcgttatctgccgggtcagtactggtcacaaacaatagccgccactat
gaacggatcgaagcgccgttaatcctggcgaattgggcgtaa

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