Sulfurimicrobium lacus skT11: SKTS_25170
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Entry
SKTS_25170 CDS
T06796
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
slac
Sulfurimicrobium lacus skT11
Brite
KEGG Orthology (KO) [BR:
slac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slac03016
]
SKTS_25170 (truB)
Enzymes [BR:
slac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SKTS_25170 (truB)
Transfer RNA biogenesis [BR:
slac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SKTS_25170 (truB)
Prokaryotic type
SKTS_25170 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Saf-Nte_pilin
Motif
Other DBs
NCBI-ProteinID:
BCB27631
UniProt:
A0A6F8VEN1
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All DBs
Position
complement(2623694..2624623)
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AA seq
309 aa
AA seq
DB search
MLQFKRIKRPISGVLLLDKAHGISSNTALQQVKRLFQAEKAGHTGNLDPLATGLLPLCFG
EATKFSQYLLDADKVYQAVIKLGATTTTGDVEGEIISQCPVSVSQMQVEQVLRNFTGPMQ
QIPPMYSALKHQGKALYTYARAGIDIERKARDITIYRLDLDEFCGDELSVTVSCSKGTYI
RVLAEDIGAELGCGAHLKALRRISTGGFDLAHALTLSQLEQMQPEQRDACLLPADCLVEG
LPKVFLDRESAFYVQQGQEVWQPKQSSTGLVSLYGPDQVFLGLGEITDAGKVAPKRLIVT
AKNQATLLS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcagttcaagcgtattaaacgcccgatcagtggtgtcttgcttctcgataaggcg
cacggcatctcgtccaatactgcgttgcagcaggttaaacggctgtttcaggcggagaag
gcaggccacaccggaaatctcgacccccttgccactgggctgttgcctctctgctttgga
gaagcgacaaagttttcgcagtacttgctggacgcggacaaggtctaccaggcagtcatc
aaactcggcgccaccacaaccacaggcgacgtcgaaggcgaaatcatcagccagtgtcca
gtgagtgtaagccagatgcaggtggagcaggttttacgcaacttcaccggccccatgcaa
caaatcccgcccatgtattcggccctgaaacaccagggaaaagcgttgtatacctatgcg
cgcgcgggcatcgatattgaacgtaaggcgcgcgatataacaatctaccgtcttgacctg
gatgaattttgtggcgatgaattaagtgttacggtgagctgcagcaaggggacatatatc
cgggtgctggccgaggacatcggtgcggaactcggttgcggtgctcaccttaaggcgcta
aggcgaatctccaccggcggctttgacctcgctcatgcgctgacgctatcgcaactggaa
cagatgcagcccgaacaacgcgatgcctgcttgctacccgcggattgcttggttgaaggt
ttgcccaaggtgttcctcgatcgtgagagtgcgttctacgtgcagcagggacaagaggtg
tggcaaccaaagcagtcaagcacaggactggtaagcttatatggaccggatcaggttttt
ctcgggttgggggaaattaccgatgcaggcaaggttgcgcccaagaggctcattgtgaca
gcaaagaaccaagcgaccttgctgtcctga
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