Sulfurimicrobium lacus skT11: SKTS_34060
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Entry
SKTS_34060 CDS
T06796
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
slac
Sulfurimicrobium lacus skT11
Pathway
slac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
slac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SKTS_34060 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slac03400
]
SKTS_34060 (mutM)
Enzymes [BR:
slac01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SKTS_34060 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SKTS_34060 (mutM)
DNA repair and recombination proteins [BR:
slac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SKTS_34060 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
BCB28520
UniProt:
A0A6F8VGP6
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All DBs
Position
complement(3539217..3540032)
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AA seq
271 aa
AA seq
DB search
MPELPEVETTCRGLEPHLRGQRIHAVIVRDARLRVPILAELAHILPGLEIRGIGRRGKYL
LMDCGRGWLILHLGMSGSLRILPSDALAEKHDHFDLVLESGFCMRLRDPRRFGAVIWTET
DPLRHPLLAHLGVEPLTNDFDGAWLYRHTRGKKGSIKQTLMDSHLLVGVGNIYANEALFR
AAIRPTTPAGRVGASRCDRLARAVKDVLQQVIAAGGSSLRDFVDSNGKPGYFQQQYFVYG
RAGEPCRQCGVPIRLLRQGQRSTFYCPDCQR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgcccgaagtcgaaactacctgtcgcgggctcgagccgcaccttcgcggc
cagcgcatccacgccgttatcgtgcgcgatgcccgcctgcgtgttcccatcctggcagaa
ctggcgcacatcctgccgggactggaaattcgcggtatcgggcggcgcggaaaatacctg
ttgatggattgcggccggggctggctgatcctgcatctgggaatgtccggcagcctgcgc
atcctgccgtctgatgctctcgcggaaaaacacgaccatttcgacctggtgctggaaagc
ggtttttgcatgcgtttgcgcgacccgcgccgcttcggtgccgtaatctggacagaaact
gacccgctgcgtcacccgctgctggcgcacctgggcgtggaaccgctgaccaacgatttc
gatggcgcgtggctttatcgccatacccgcggaaaaaagggcagcatcaagcaaacgctg
atggacagccatctgctggtcggcgttggtaacatatacgccaatgaagcgctgttccgc
gcggctatccggccaactacgccggccggacgtgtcggcgcgtcgcgttgcgaccggctg
gcgcgggcggtcaaggacgtgttgcaacaggtcattgccgcgggggggagcagcctgcgc
gatttcgtggacagcaacggcaagccgggctatttccaacagcagtatttcgtctacggg
cgcgccggagagccgtgccggcaatgcggtgtccctatccgactgttaaggcagggtcag
cgctcgactttttactgtcccgattgccagcgctag
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