Sulfurimicrobium lacus skT11: SKTS_35790
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Entry
SKTS_35790 CDS
T06796
Symbol
msbA
Name
(GenBank) lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
slac
Sulfurimicrobium lacus skT11
Pathway
slac02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slac00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SKTS_35790 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slac02000
]
SKTS_35790 (msbA)
Enzymes [BR:
slac01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
SKTS_35790 (msbA)
Transporters [BR:
slac02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SKTS_35790 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
DEAD
AAA_22
AAA
Mg_chelatase
NACHT
Zeta_toxin
ABC_ATPase
RsgA_GTPase
nSTAND3
AAA_25
AAA_29
DUF3584
nSTAND1
AAA_24
AAA_5
APS_kinase
NB-ARC
OPT
Motif
Other DBs
NCBI-ProteinID:
BCB28693
UniProt:
A0A6F8VFU3
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Position
3716315..3718081
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AA seq
588 aa
AA seq
DB search
MTSSPELDGKQLYQRLLRFVLPYWRIFLVSIISMALVAATEPAFPALLKPLLDGSFVKKD
PGMMRLIPLLLIGLFILRGIATFTSSYAISWVANKVVMDLRCLMFGKLVALPTHYYDDNS
SGVLMSKVTYDVSQVTNAATNVITIVVRDSLSIAGLLGWLLYLNWRLTLVALIVVPAIAF
VIRSFSGRLRNMSRGAQQAMGHITHVLEETIECHKVVKIFGGQEYEARRFQEAANQVRRF
NIKQAIAASATVPLVQLIAAIALAVIIYIATMQSASDQTTVGGFVSFITAMLMLLAPLKR
LTGVSESLQRGLAAAESVFNLIDEEAETDKGTISLPRAQGALEFRDLGFTYGRSERMALN
SISLAIRPGETVALVGQSGSGKTTLANLIPRFYTPTSGQILLDGYDIQTIRLADLRSNTA
LVSQDVVLFNDSVSANIAYGRQSGATEAEIVAAAEAAHAMEFIREMPEGIHTQIGENGVR
LSGGQRQRLAIARAILKNAPVLILDEATSALDTESERHVQAALETLMQGRTTIVIAHRLS
TIEKADRIVVLQKGHIAEIGSHSELLAKDGIYANLHRIQFSQEKPHET
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcatctccggaacttgacggcaaacagctttaccagcgtttgctgcgatttgtc
ctgccctactggcgcattttcctggtttccataatcagcatggcgctggttgccgccacc
gaaccagccttcccggcattgctcaagcccctgctcgacggcagtttcgtgaaaaaagac
cccggcatgatgcgccttatcccgctgttgctgatcgggcttttcatcctgcgcggcatc
gccacgttcaccagttcctacgccatcagctgggtcgcaaacaaagtggtgatggatctg
cgctgcctgatgttcggaaagctcgtggccttgcccactcactactacgacgacaactcc
tccggcgtcctgatgtccaaggttacctacgacgtcagccaggtgaccaatgccgccacc
aacgtcatcaccatcgtggtgcgcgactccctcagcatcgccggcctgcttggctggctg
ctctatctgaactggcgactgaccctggtggccctgatcgtggtgccggccatcgccttc
gtcattcgcagcttcagcgggcgcctgcgcaacatgagccgcggtgcccagcaagcgatg
ggccacatcacccatgtgctggaagaaaccatcgagtgccacaaggtagtgaagatattc
ggcggccaggaatatgaagcgcgacgttttcaggaagcggccaaccaggtgcgccgtttc
aacatcaagcaggctatcgccgcgtcggccaccgtgccgctggtacagctcatcgcggct
atcgcactggcggtgatcatctatatcgccaccatgcaatcggcttcggaccagaccacg
gttggcggcttcgtctccttcattaccgccatgctgatgctgctggcgccgctgaaacgc
ctcaccggcgtcagcgaaagcctgcaacgcggcctggctgcggcggaaagcgtattcaac
ctgatcgacgaagaagcggaaaccgacaagggcacgatttccctgccacgcgcgcagggc
gcgctggagttcagggatctcggctttacctatggccgttccgaacgcatggctctaaac
agcatctcgctggccatccgtccgggcgaaaccgtcgcgctggttggccagtccggcagc
ggcaagactacactggccaacctgattccacgtttttacacgccgaccagcggccaaatt
ctgctggacggatacgacattcaaaccatcaggctcgccgatctgcgttccaataccgcc
ctggtcagccaggatgtcgtactgttcaacgacagcgtatccgccaacatcgcctacgga
aggcaaagcggggccaccgaagccgaaatcgttgccgctgctgaagcagcccatgccatg
gaattcatccgcgaaatgcctgaaggcattcatacccagatcggcgaaaacggtgtgcgc
ctgtccggtggacagcgccagcgcctggcgatagcgcgagcgatcctgaaaaacgcaccg
gtgctgatcctcgacgaagccacttcggcgctcgacaccgaatccgagcgccacgtccag
gcagccctggaaacgctgatgcagggacgcaccaccatcgtgatcgcgcaccgcctttcc
accatcgagaaagccgaccgtatcgtcgtcctgcaaaaagggcacatcgccgagatcggc
agccacagcgaacttttggcaaaagatggcatctacgcgaaccttcaccgtatccagttc
agccaggaaaaaccacacgagacatga
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