Silene latifolia (white campion): 11541080
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Entry
11541080 CDS
T11116
Symbol
rbcL, SilaC_p029
Name
(RefSeq) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00630
Glyoxylate and dicarboxylate metabolism
slaf00710
Carbon fixation by Calvin cycle
slaf01100
Metabolic pathways
slaf01110
Biosynthesis of secondary metabolites
slaf01200
Carbon metabolism
Module
slaf_M00165
Reductive pentose phosphate cycle (Calvin cycle)
slaf_M00532
Photorespiration
slaf_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
11541080 (rbcL)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
11541080 (rbcL)
Enzymes [BR:
slaf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
11541080 (rbcL)
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Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
11541080
NCBI-ProteinID:
YP_005089585
UniProt:
H2BLN6
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Position
Pltd:54117..55544
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AA seq
475 aa
AA seq
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MSPQTETKASVGFKAGVKDYKLTYYTPEYETLDTDILAAFRVSPQPGVPPEEAGAAVAAE
SSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEENQYICYVAYPLDLFEEGSVTNMFTSI
VGNVFGFKALRALRLEDLRIPIAYVKTFLGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYL
NATAGTCEEMMKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV
IDRQKNHGMHFRVLAKALRLSGGDHIHAGTVVGKLEGEREITLGFVDLLRDDFTEKDRSR
GIYFTQSWVSTPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN
RVALEACVQARNEGRDLAREGNTIIREACKWSPELAAACEVWKEIKFEFQAMDTI
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccacaaacagagactaaagcaagtgttggatttaaagctggtgttaaagattac
aaattgacttattatactcctgagtatgaaaccctagatactgatatcttggcagcattc
cgagtaagtcctcaacccggagttccacccgaagaagcaggggccgcagtagccgccgaa
tcttctacgggtacatggacaactgtatggaccgacggacttaccagtcttgatcgttac
aaaggacgatgctaccacatcgagcctgttgctggagaagaaaatcaatatatttgttat
gtagcttaccccttagacctttttgaggaaggttctgttactaacatgtttacttccatt
gtgggtaatgtatttgggttcaaagccttgcgtgctctacgtttggaggatttgcgaatc
cctattgcttatgtaaaaactttcctaggcccgcctcacggtatccaagttgaaagagat
aaattgaacaagtatggccgtcccctattgggatgcactattaaacctaaattggggtta
tctgctaaaaactatggtcgagcagtttatgaatgtcttcgcggtggacttgattttacc
aaagatgatgaaaacgtgaactcccaaccatttatgcgttggagagaccgcttcttattt
tgtgccgaagcactttataaagcacaggctgaaacaggtgaaatcaaagggcattacttg
aatgccactgcgggtacatgtgaagaaatgatgaaaagggctgtatttgccagagaattg
ggagttcctatcgtaatgcatgactacttaacaggtggattcactgcaaatactagcttg
gcccattattgccgagataatggtctacttcttcacatccaccgtgcaatgcacgctgtt
attgatagacagaaaaatcatggtatgcacttccgtgtactagctaaagcattacgtctg
tctggtggagatcatattcatgccggtaccgtagtaggtaagcttgaaggggaaagagaa
atcaccttaggctttgtggatttactacgtgatgattttactgaaaaagacagaagtcgc
ggtatttatttcactcaatcttgggtttctacaccaggtgttctgcccgttgcttcggga
ggtattcacgtttggcatatgcccgctctaaccgagatctttggagatgattccgtacta
cagtttggtggaggaaccctaggacacccttggggtaatgcgccaggtgctgtagcgaat
cgagtagccctagaagcatgtgtacaagctcgtaatgaaggacgtgatcttgctcgcgag
ggtaatactattattcgcgaggcttgcaaatggagtcctgagctagctgctgcttgtgaa
gtatggaaggaaattaaatttgaattccaagcaatggatacaatctaa
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