Silene latifolia (white campion): 141585971
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Entry
141585971 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141585971
KO
K14306
nuclear pore complex protein Nup62
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141585971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141585971
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141585971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
FapA
COG3_N
Prefoldin_2
Motif
Other DBs
NCBI-GeneID:
141585971
NCBI-ProteinID:
XP_074263162
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All DBs
Position
6:2909133..2916295
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AA seq
707 aa
AA seq
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MAGFTGFNFNNTSTPSSSSASSPFAFSNTSSAPAFSFSSSAASTTTTTAASPPLFGSPSP
NLFSSTTTTTTPAAASPSLFGTPSSNLFSSTATSSAAASPPLFGTPSSAAASSPLFGTPS
SNLFSNTSSFLKPSSSSSSSSSSSFAFNLPASSSSSSAPLSSQPSFAFGTALSSAASSTP
LTSQSSFGFGTAPSSAASASKPLFGAPTTTTTTTTTTSPFSGFGLNTASSTTTNTTSAFP
SFGATTAAAATTTNTTSAFPSFGATTATATSTTTNTTGAFPSFGVSTTPSLLSSSSTAAT
TSSFSGFGIPTSATPASTVATNSNFSGFGISSTATPPSTIAASSAAGTTSSFTGFGISTT
TTPPSSTPAASAAAATSSFTGFGISAPASGSSAAAATTSSFTGFGISATTTPPSSTAGTT
TASLSGFSLPATKTTASTQTFSLTPTAATTAASTITAATTASVPVSSSTTTTAQISSSLV
VASSSGTTSAVSTPAVSAPKMPSEMTGKTVEEIIKQWNSELQERTRKFQKQANEIAEWDK
RILLNRDVLFRLETEVANVVQTQSSLERQLELIETHQDEVDKALQSIEDEAERIYKDERG
LLLDDEAASTRDAMYEQAEFAERELEHMTEQIKSIIQTLNAAQGGELDTTEGMSPLDVVV
RILNNQLSSLMWIDEKAEEFSSRIQKVATQGSASDRELVAQTPRLWR
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggcgggatttaccggctttaatttcaacaacacttctactccctcttcctcctccgcc
tcatctccattcgccttctccaacacttcctccgctcccgccttctccttctcctcctcc
gccgcctccaccaccaccacaaccgccgcatctccgccattattcggatctccctcccca
aacttattctcctccaccaccaccaccaccacgcccgccgccgcatctccgtcgttgttc
ggtactccctcctccaatttattctcctccaccgccacctcctccgccgccgcatctccg
ccgttgttcggtactccctcctccgccgccgcatcttcgccattgttcggtactccttcc
tccaatttattctccaacacctcatcattcctcaaaccttcatcttcatcttcatcgtct
tcgtcttcgtctttcgcattcaatctccctgcttcttcgtcttcctcgtcggctccgtta
tccagccaaccgtccttcgctttcggcactgcgctgtcatccgcggcttcttcaactccg
ttgactagtcaatcttcctttggtttcggcactgcgccgtcatccgccgcttctgcttcg
aaaccgctctttggcgctccaaccacaaccacaaccaccacaacaacaacctcaccgttt
tccggcttcggtttaaatactgcttctagtactactactaatactaccagtgcttttcct
agtttcggcgcaactacagcggcagctgctactactactaatactaccagtgcttttcct
agtttcggcgcaactacagcgactgctacgagtactactactaatactactggtgcgttt
cctagtttcggagtatccactacgccttctttgttatcgtcttcttcaactgctgcaact
actagttctttctctggtttcggcattcctactagcgccacgcctgcttctaccgttgct
actaatagtaatttcagtggtttcggcatttctagtaccgccacacctccgtctacaata
gctgcttcttctgctgctggtactactagttctttcactggtttcggcatttctactacc
accacgcctccgtcttccacaccagctgcttctgctgctgctgctactagttctttcact
ggtttcggcatttcagccccagcttctggttcttctgctgctgcagctacgactagttct
ttcactggtttcggcatttctgctaccactacacctccgtcttccacagctgggactact
actgcatcactgtcgggtttttcactcccagcgacgaagactacagcgtctactcaaact
ttctcattgactcctacagccgctacgactgctgccagtacaattaccgctgccactact
gcttctgtgcctgtctcgagctctaccacaaccactgcacagatatcctcatctcttgtt
gtagcatcaagtagtggaactacttctgctgtaagcacaccagcagtatcagcccctaag
atgccttcagagatgactgggaaaactgttgaagagattatcaagcagtggaactcagaa
ctacaggagcgtacacggaaattccagaagcaagctaatgaaattgctgagtgggacaag
agaatcttgctaaatcgagatgtcctctttcgactagagactgaggtggcaaatgtggtg
caaacacaatcaagcttggagcgacaattagagttaattgagactcatcaggacgaggtt
gataaagctttgcaaagtattgaagatgaagctgaacgtatctacaaagatgagcgtgga
ttgcttctggacgatgaggctgcatctaccagagatgcaatgtatgaacaggctgaattt
gctgagagggaactggaacacatgactgagcaaatcaaatcaatcatccagacattgaac
gccgctcagggcggagaacttgatacaactgaaggcatgagtccattggatgtggttgta
cggattttgaacaatcaattgagctccctgatgtggattgacgaaaaggcagaagagttc
tcctctcgcattcagaaagttgcgacccaaggttcagcttcagatcgtgaattggtggcc
caaacaccaagattgtggaggtga
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