Silene latifolia (white campion): 141586041
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Entry
141586041 CDS
T11116
Name
(RefSeq) flap endonuclease GEN-like 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slaf03400
]
141586041
DNA repair and recombination proteins [BR:
slaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
141586041
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
XPG_I_2
5_3_exonuc
Hydrolase_4
Motif
Other DBs
NCBI-GeneID:
141586041
NCBI-ProteinID:
XP_074263243
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Position
6:4071802..4078200
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AA seq
609 aa
AA seq
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MGVGGNFWELLKPYAKYEGFDYLRNKKVAVDLSYWIVQHETALKSSNVKNPHLRLTFFRT
INLFSKFGAFPVFIVDGKPSPLKSQARIARYFRLSGSDMKDLPLIEEGVSVDRNKFFVKC
VEECVELLNLLGMPVLTALGEAEALCAQLNSEGLVDACITADSDAFLFGAKCVIKHLNPK
SKEPIECYHMEDIELNLGLRRKHLVAVALLVGTDHNLSGVPGIGMETALRFVEKFSEDEV
LQRLHEISSGSILPLDADFGSPRKCARISTESPQGPKTPHCSLCGHPGSKTTHRKVPCEY
CQSSSGINCSKKSPGFKCECAACDWKREEKEHRKTENWCLKVCKKIKECSFSSNEIAELY
LGNEVVEGIRPCLSWKKPDLEMLVDFSAYYLHWDPFYVRQRIFPMLSTIFLREKALNSED
VLLDGQYEFDSIQRLKIRCGHQFYTIKWRKSMSVTSNVEDSVSSERYSVGSDIQFEEILM
DESLNSLDELDVPQVHIDGGCHYVSSDENLELVQNAFPADVDRFLKQKEVKESKRKSRYS
EGTVETPRTPNMRGDQMAITDYYRSSKTLKEAKSSEDFVTGSETYRLKGKSKVSSETLPK
SVRRRLLFG
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgggagttggaggaaatttctgggaattactaaaaccctatgcaaaatatgagggtttt
gattatctaagaaacaaaaaagttgctgttgatctctcttattggattgtacaacatgaa
actgctcttaaatcttccaatgtcaaaaaccctcatcttagactcactttcttccgtacc
atcaatcttttctcaaagtttggagcgtttccggtatttatcgttgatggaaagccgtct
ccactgaagtctcaagcgaggattgcacgatatttcagattgtctggcagtgatatgaaa
gatcttcctctaattgaagagggtgtttcggttgaccggaacaagttttttgtaaagtgt
gtcgaggaatgtgtggagcttctcaatcttctcgggatgcctgttctaacagctttaggt
gaggctgaagcactttgtgctcagttaaatagtgaaggtttagtggatgcttgcattaca
gctgatagcgacgcgttcctttttggggctaaatgtgtgataaagcatttgaatcctaaa
tcaaaagaaccaattgaatgctatcacatggaagatattgaactaaatctgggtttaaga
aggaaacaccttgtagctgttgctcttttagttggtactgaccacaatctaagtggagtg
ccaggaataggaatggaaaccgctcttcgttttgtcgaaaaatttagtgaagatgaagtt
ctacagagattacatgaaataagttctggatccatacttccattggacgctgattttggt
tctcctcgcaagtgtgcaagaatttcgacagaatcacctcagggaccaaaaactccacat
tgctctttgtgcggtcatccaggcagcaagactacccatcgcaaagtcccttgtgaatat
tgtcaaagcagtagtggcattaactgtagtaaaaaatcccctgggttcaaatgtgaatgc
gctgcttgtgactggaaacgggaagaaaaggaacataggaaaacagaaaactggtgccta
aaagtgtgcaagaagataaaggagtgcagtttctccagcaatgaaatcgctgaactgtat
ttgggaaatgaagttgttgagggtatcaggccttgcctatcttggaaaaagccagatttg
gaaatgttggttgatttttcagcttattatcttcactgggatccattttatgtaaggcag
cgaatatttccaatgctctccaccattttcttgagagaaaaggctttgaattctgaagat
gttttattagatggccaatatgaatttgactcaattcaacgactaaaaattcgttgtggt
catcagttttatacgatcaagtggaggaaatccatgtcagtgacgagcaatgttgaggat
tcagtatcttctgaacggtattctgttggatctgacattcaatttgaagaaattcttatg
gatgaatctctcaattctttggatgagctggatgtgcctcaggtacacattgatggtggc
tgccactatgtatcctcagatgaaaatttggagttagtccagaatgcttttccagcagac
gttgaccgctttttaaagcagaaagaagttaaagaatcgaaaagaaaatctaggtatagt
gaaggaactgttgaaaccccacgaactccaaacatgagaggagatcagatggcaattaca
gactactaccgttcaagcaaaacactaaaggaggccaaaagttctgaggatttcgttaca
ggttcagagacatatcgtttgaaggggaagagcaaggtctcaagtgaaacccttcctaaa
tctgtgagacgtcgtcttttgtttggctaa
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