Silene latifolia (white campion): 141586288
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Entry
141586288 CDS
T11116
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1-like isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slaf04131
]
141586288
04121 Ubiquitin system [BR:
slaf04121
]
141586288
Enzymes [BR:
slaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141586288
Membrane trafficking [BR:
slaf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
141586288
Ubiquitin system [BR:
slaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141586288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
Prok-RING_1
zf-RING_16
zf-RING_4
zf-Nse
Prok-RING_4
zf-Vps39_C
DUF7685
Motif
Other DBs
NCBI-GeneID:
141586288
NCBI-ProteinID:
XP_074263563
LinkDB
All DBs
Position
6:10434839..10436888
Genome browser
AA seq
350 aa
AA seq
DB search
MSLSPPRTRRSPTTNYNLHWCYQCRRAVRISTGNPSEVVCPRCFGQFVCEMEVPRRRLVV
DHTDYDSSPGSRLLEALALMLDPPVRIYDRDADDPWAITRGPSRRNGGIYGPGSGRSRWI
RASPSHPSNPRDEWGTEPGLRTRPRWIILRPIGQTPGPVTRPEGLIPQGGDPRNYFTGPG
LQELIQELTDNDRPGPPPAPEEAIEALPTVKLSEAHVAEGGSECPVCKEELEMGTEVRIL
PCKHVYHSDCIVPWLRLHNSCPVCRMELSEPDENRGVESVGSNTENGENRGCLNWDRLRS
LWPFRSRYRRIDPNQEDGRIATGAFGLACALCLILAIPLVAYAQYLTTNS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgagtccacctcgcacgcggcggtctccaacgacaaactacaatctccattgg
tgttaccaatgtcgacgagcggtcaggatttccacgggaaacccgtcggaggttgtatgc
ccacgatgcttcggtcagtttgtttgtgagatggaagtcccgaggcgtagattggtggta
gaccatactgattacgattcttcacctggatctcgcctgttagaagccttggccctcatg
ctggatccaccagtgaggatctatgacagggatgctgatgacccatgggccataactcga
ggcccgtctagacgaaatggtgggatatacgggccaggctctggtaggtcaagatggatt
cgagcctcaccatcacatccctcgaaccctagggatgagtggggtacggaacccgggttg
cgaaccagacccagatggatcatactcaggccaataggccagaccccgggtccagtaact
aggccagaagggctgattcctcaagggggtgatccaaggaactacttcactggaccaggt
ctgcaggagctgatacaagagctaactgataatgacaggccaggtccgcctccggcaccc
gaagaagcaatcgaggctctaccaacagttaagctgtcggaagcgcacgtggccgaggga
ggttcagagtgcccagtgtgtaaagaagagcttgaaatggggactgaagttaggatccta
ccttgtaaacacgtgtatcattcagactgcatcgtaccttggttgaggcttcataactcc
tgccctgtttgcagaatggaactatcagagccggatgaaaacagaggtgttgaatcagta
ggttcaaatactgaaaatggtgagaaccgaggatgtttgaactgggacagattgagatca
ctttggcccttccgttcgcgatatcgcagaattgatccgaatcaagaagacgggagaatt
gccacaggagcatttgggttggcatgcgccttgtgtctaatacttgccataccattggtg
gcatatgctcaatatctgactaccaactcgtag
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