Silene latifolia (white campion): 141586303
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Entry
141586303 CDS
T11116
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
slaf01002
]
141586303
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141586303
Enzymes [BR:
slaf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
141586303
Peptidases and inhibitors [BR:
slaf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
141586303
Ubiquitin system [BR:
slaf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
141586303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
NosD
Motif
Other DBs
NCBI-GeneID:
141586303
NCBI-ProteinID:
XP_074263588
LinkDB
All DBs
Position
6:complement(10784657..10794127)
Genome browser
AA seq
1043 aa
AA seq
DB search
MLVPGELGFRVAVVLIFVVFPVFGLFLRRKWRLEVAKGEINRLIVLAGEEDDQAYIDTNI
SFFAAETAPLKPPTRAVVPRSRVCAVCFTPTSNRCSRCKSVHYCSGKCQIVDWRQGHKDE
CYPSPANSEINDEASSFSGNALNQPYSDEHGTQIDIDGLPGDEHGETAAFSSPYISAKDG
DAAIDSNVCVEESHPFSVHHNSAVSFRLPPAFPGRDTCINDSSSDDDSVHNLISESCDSS
STFENFETATSDGQMEQINPLEEKSYMKSYTRVDSAGGVYASHDLRDDNPSGKIHSSSLR
VSHSVTNVVEPTVSTTGFWDGILDTSRTTTYVPNNNVKHKPVGAGPEKLPNLKSTVQSDT
VHNNPRAAWTSNKESAAAIRRQNSTFLSSKEPGTRTTGANERHVKFNLVSDTSVGISLPS
SSPRANDLENNNHDTQPSLASQKAGFSPEQSDVFSSSDLKWHSALATKPEKAVGNAALPS
QVARSTESASIGRKSSMLKVVEQLRAPRSSKQGDGAVNDGKKAVVAYDSFVKLYHWNKVD
FLPCGLINCGNSCYANAVLQCLTFTPPLTAYFLQGLHSKACVRKEWCFTCEFERLVLKAK
EFGYPQSPIGILSQIHKLGSRLTNGREEDAHEFLRYAIETMQSICLREAEVKDFSSLEEE
TTLTGLTFGGYLRSKIKCTRCNGKSVKQERMMDLTVEIEGDIETLEDALRQFTRTESLDG
ENKYHCGRCQSYEKAKKKLDILEAPNILTIALKRFQSGRFGKLNKSIRFPEILNLAPYMR
IGSDKAPVYRLYGAVVHLDTMNASFTGHYVCYVRNAQNKWFKIDDSTVKPVDLDEVLNMG
AYMLFYSRCSPRAPKSIRSMISRDLSSKITNKVNLAYIPRDETRHPLPNILEADSSSDNS
SVFSHSDVSTSTDSSRESNSTDEFSEFFFGNNGFSRSSDLDTSSSSSSSSSPLYMKRSPL
SNSKRYASAFPEHNVLQTDNGKAHNEPCGVTFLNSNSSSQVRNARVVNISGSEIDAKRLG
MANPLDNGKSGVHLRRSSRRKPD
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtacctggggaattagggtttcgtgtagctgtcgttttaatttttgttgttttt
ccggtgtttgggttatttctccggcgtaaatggcggctcgaggtcgccaaaggagagatc
aaccgacttattgttttagctggcgaagaagacgatcaagcctatatcgataccaatatc
agcttttttgctgcagaaacggcgccgttgaagcctcctacgcgcgcggtggttccgagg
agccgtgtttgcgctgtttgttttactcctacatcgaatcgatgctctagatgcaagtcg
gttcattactgttctggcaagtgccaaatcgttgattggagacaaggtcacaaggatgaa
tgttatccatcgccggccaactctgagataaatgatgaagccagtagtttctcaggaaat
gctttaaaccagccttactctgatgaacatggaacccagattgacattgatggattacca
ggtgatgaacacggcgaaactgctgcattctcttctccatacatatctgcaaaggatggg
gatgctgcaattgacagtaatgtatgtgtagaggaatcccatccattctcagtacatcac
aacagtgcagtatcatttcgactgcctcctgctttccctggtcgtgacacatgcatcaac
gattcttcctcagatgatgactctgtacacaatcttatttctgagtcatgcgattcatct
tccacatttgaaaactttgagactgctacaagtgatgggcaaatggagcaaattaatccc
ctggaagagaagtcctacatgaagtcttatacaagggtggattctgctggtggtgtttat
gcttcacatgatctaagggatgacaatcccagtgggaagatacattcttcaagtttgagg
gttagtcactctgtcacgaatgttgttgagcctacggtttctacaactggtttctgggat
ggaattcttgacactagcagaaccacgacatatgttcctaataacaatgtcaagcataaa
cctgttggagctggtcccgaaaaacttccaaacttgaagtccactgtgcagtctgacaca
gtacataataatcctcgtgcagcatggacttccaacaaggagtctgcggccgcaataaga
cgtcagaactcgacattcttgagttcgaaggagcctggcaccaggacaacaggggctaat
gaacgtcatgttaagtttaatcttgtatccgatacttcagtaggtattagcttgccatct
agttcccctagagcaaatgacttggagaacaataaccacgacactcaaccgtcgctggca
tcccaaaaggcggggttttctccagagcagtcagatgttttttcatcatctgacttgaag
tggcattctgcactggctacaaagcctgaaaaagctgttggtaacgctgctttaccctct
caagtagctagatctacagaaagtgcttctattggccggaaatcatctatgctgaaagtt
gttgagcagcttagagctccaaggtcatcaaaacagggtgatggtgctgtaaacgatggc
aagaaggcagtggttgcttatgattcatttgttaagctctatcattggaacaaggtggat
tttcttccatgtggcctaataaattgtggcaacagctgctatgccaatgctgtactacaa
tgtttgacatttactcctccgctcactgcgtattttcttcaaggacttcattccaaagca
tgtgtgagaaaagaatggtgcttcacttgtgagtttgaaaggttggttttgaaggcaaag
gagttcgggtatccacaatctcctataggcatattatctcaaatacacaagcttggtagc
cgtcttactaatggaagggaagaagatgctcatgagtttctaaggtatgctattgaaaca
atgcaatctatctgcctccgagaagcagaggtgaaggattttagctcgctggaagaagaa
acaacattaacagggctcacttttggaggttatcttcgctcaaagatcaaatgcacaagg
tgcaacggaaaatctgtgaagcaggaaagaatgatggatttgaccgtggagattgaagga
gatatagagaccttggaagatgctttgcgacagttcacacgaactgagagtcttgatgga
gaaaacaagtatcactgtggcaggtgtcaatcttatgagaaagcaaagaagaaattggac
atattggaggctcccaatattcttacaattgcattgaaacggtttcaatcaggtagattt
gggaaactcaataagtcaatccgattcccggagatactaaaccttgccccatatatgagg
ataggaagcgacaaagcaccagtttatagactttatggagccgtggttcacttggatact
atgaacgcatccttcacgggtcattatgtttgttacgttcgaaatgcccagaacaagtgg
ttcaagattgatgacagcacggtgaagcctgtggatttggatgaagtgctgaatatgggc
gcatacatgctcttttactcgaggtgctcaccgcgtgctcctaaatccattagaagcatg
atttcccgtgatttatcaagcaagattacaaacaaggtaaatcttgcttatattcctcga
gatgaaaccaggcacccgctacccaacattcttgaggccgactcttcaagtgacaactct
tcggtgtttagtcattcagatgtatcaactagcaccgacagctctcgagaatcaaatagc
acagatgaattttccgagtttttctttggtaacaatgggttttccaggtcatcagattta
gacacctcatcttcctcatcttcttcgtcttctcccctatacatgaagcgttctcctctt
tccaattccaagaggtacgcttcagcctttcctgaacataatgttctccagactgacaac
ggcaaagcacacaacgagccttgtggtgtcacatttttgaattctaacagtagtagtcaa
gttaggaatgcacgagtagtaaatattagtggtagtgagattgacgccaaaagattagga
atggctaaccccttggataacggtaaatcaggtgtacatctaagacgatcatccagaaga
aaaccagattaa
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