Silene latifolia (white campion): 141586348
Help
Entry
141586348 CDS
T11116
Name
(RefSeq) putative small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141586348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141586348
03041 Spliceosome [BR:
slaf03041
]
141586348
03032 DNA replication proteins [BR:
slaf03032
]
141586348
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
141586348
Spliceosome [BR:
slaf03041
]
Complex A
U1 snRNP components
Sm proteins
141586348
U2 snRNP components
141586348
Complex B
U1 snRNP components
141586348
U4/U6.U5 tri-snRNP components
141586348
Complex C
U2 snRNP components
141586348
DNA replication proteins [BR:
slaf03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
141586348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
141586348
NCBI-ProteinID:
XP_074263642
LinkDB
All DBs
Position
6:11642484..11646322
Genome browser
AA seq
87 aa
AA seq
DB search
MATVPVNPKPFLNNLTGKQVIVKLKWGMEYKGYLVSVDGYMNLQLADTEEYIEGEMTGNL
GEILIRCNNVLYLRGVPEDEEMDGDRD
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgtcccagttaaccctaaacctttcttgaacaacttgactgggaaacaagtc
attgttaaattgaagtggggaatggagtacaaaggttatcttgtctctgtggatggctac
atgaatttgcagttggcagacaccgaggagtatattgaaggtgaaatgactggaaatctt
ggagagattcttatcaggtgcaacaatgttctatatcttcgaggggtacctgaggatgaa
gagatggatggtgacagggactga
DBGET
integrated database retrieval system
