Silene latifolia (white campion): 141586353
Help
Entry
141586353 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141586353
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
141586353
Enzymes [BR:
slaf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
141586353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
141586353
NCBI-ProteinID:
XP_074263652
LinkDB
All DBs
Position
6:12008667..12013202
Genome browser
AA seq
677 aa
AA seq
DB search
MAGMSSSKGGKPWICCCGGGGVDPGPNPGPAPAPAPTPPTDQPVRVQILDRYVVLDNGLL
QVTLSKPGGIVTGISYNGIDNLLEVRNGEDNRGYWDLVWNDANTPGTFDVIKGSNFQVIV
SNDDQVEVSFSRQWDPSLKGKAVPLNIDKRFIMLRGSSGFYTYAIYEHLPDWPGFSMGET
RITFKLNKQWFQYMAIADDRQRQMPLPDDRMPGRCQPLAYPEAVLLTNPVDPNLKGEVDD
KYQYSCDNKDIKVHGWLSTAQPTGFWQITPSYEYRSGGPVKQNLTSHVGPTSLSVFLSAH
YAGDPLVPKFNDGEPWKKVFGPVFIYCNSVPADTDWHWLWEDAKQQMTIQTQMWPYSFPA
SDDFPKSDQRGNVNGRLLVHDRYTNSDDYIEANGAYVGLALPGNAGSWQTECKGYQFWTK
ADENGFFSISGVREGDYSLYAWVPGFIGDYKCDAAITITAGCDVELGDLLFEPPRDGPTL
WEIGIPDRTAAEFYAPDPNPTYVNKLYVDHPDRFRQYGLWERYAELYPNEDLVYTIGLSD
YRKDWFFAQVTRRKDNGYVGTTWQVKFKVDDVDQKGNYKLRLAIASASLAEVQVRMNDPN
ANRPIFTTGLIGRDNSIARHGIHGLYWLYSVDIPGSKLIKGDNTLYLTQPRNQSPFQGIM
YDYLRLEGPPPTASTNQ
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaatgtcatcatcaaaaggaggaaaaccatggatttgttgttgtggcggaggt
ggtgtggaccctggtccgaacccgggtccagcaccggccccggccccgaccccgcccact
gatcagcctgttcgtgttcagattcttgatcgttatgtagtattggacaatggcctgctt
caagtgacgctgtcgaaaccaggaggaatcgtcactggaatatcatacaatggcattgac
aatttgcttgaagttcgaaatggcgaggacaatagggggtactgggatcttgtttggaat
gatgctaatacacccggaacatttgatgtgataaaaggatcaaattttcaggtgatagta
tctaatgatgatcaggtagaagtttcctttagcagacaatgggatccttccctcaagggc
aaggctgtccccttgaacatcgataagaggtttattatgctgcgaggctcatctggattc
tacacttacgctatttacgagcacttgcctgattggcctgggtttagtatgggggaaact
aggatcacatttaagctcaacaaacaatggtttcagtacatggctattgcagatgacagg
caaagacaaatgcctttgcctgatgataggatgccgggaagatgtcagcctctagcgtat
cctgaagctgttttgcttacaaaccctgtagacccaaatctgaagggagaggtggatgat
aagtaccagtattcatgtgataacaaagacatcaaagttcatggctggcttagcactgcc
caacctacaggattctggcaaatcacacctagctatgagtaccgctctggcggtccagtc
aaacaaaatcttacctcccatgtgggacctacatccttatcggtgtttctgagtgcgcat
tatgcaggggatcctctggtacccaaattcaatgatggtgagccatggaagaaagttttc
ggccccgtttttatttactgcaattctgtaccagcggatactgattggcattggctctgg
gaagatgctaaacaacagatgacgatacaaactcagatgtggccttatagctttcctgca
tcagatgattttcccaagtctgatcaacggggtaatgtcaacggcagattactagtccat
gacaggtatactaatagcgatgactatatagaagcaaacggagcatatgtgggattagcc
ttgccaggaaatgctggttcatggcaaactgaatgcaagggttatcagttctggacgaaa
gctgatgaaaacggctttttctcaatctctggcgtaagggaaggggactacagtctctat
gcttgggtgcctggcttcattggagactataaatgtgatgctgccattaccataacagca
ggatgtgacgttgaattgggtgacctgctttttgagcctccaagagacggtccaaccttg
tgggaaattggaattccagatcgtactgcagctgaattttacgctcctgatcctaatcct
acatatgtcaataaactttatgttgatcatccagacaggttcagacaatacggcttatgg
gagcggtatgccgagttgtatcctaatgaagatctagtttacactattggccttagtgat
taccgaaaggattggttctttgcccaagttacaaggaggaaagacaatggatatgtgggg
acaacatggcaagtcaagttcaaagtcgacgatgtggatcaaaaggggaattacaagttg
cggttggcaatcgcttcagctagccttgctgaagttcaagtaagaatgaacgatccgaat
gcaaaccggcctatatttacaacagggctgataggacgggacaactcaatcgcaagacac
gggattcatgggctatactggctgtacagcgtggacataccaggttcgaaacttattaaa
ggggataatactctttacttgactcagccaaggaaccagagccctttccaaggaataatg
tatgactacttgcgtctcgaaggacctcctcctactgccagtacaaaccagtga
DBGET
integrated database retrieval system
