Silene latifolia (white campion): 141586358
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Entry
141586358 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141586358
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
141586358
Enzymes [BR:
slaf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
141586358
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
LEA_2
Motif
Other DBs
NCBI-GeneID:
141586358
NCBI-ProteinID:
XP_074263660
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Position
6:12025815..12031900
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AA seq
897 aa
AA seq
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METAETARLRPNTASQELRPPPAHGKYDLAKKKAMQRRGNIIKLGCISIILVLFLAFGIY
GVVLLVSFKKAEMPHFQVKSVQVSKFDVANIFISQQNVLSTDIVFNIESDNKNSMVGVEL
GNMVMETNWNEMNAHLGETHVVNVVQKTKGVSKLQVSTHGEVELSKKVVNKEDMKLEVVL
SGTLKFFNGAFKTQKYPFMVTCNDISSASSNVGCDSKLYTTGKPPESTRKGKPPPAPQGE
KSAPGTPVVEDKTPPSPPKDSFPPVKVTILDKSVILSNGFLEATIAKPAGYVTGIKYNGI
DNILDTVNPEDDRGYWDVVWAPPGTKGTKGNFQRIVAKDFRVIMEKPEQIELSFKLAYNP
TTDANKAAPMEIDQRYVMLQGVSGIYAYGIFERAAWAQFGMPNARLAFKLQRQQFKYMVI
ADNRQREMPVPEDRMKPRGQELEYPEAVLLVDPIDPKLKGEVDDKYQYSMESQDIRVHGW
ICKDPPSGFWQITPSFEFRSGGPNKQFLTSHVGPSTLAMFVSAHYSGEELIPRFQEGEPW
NHIYGPIFMYMNNLTKGDDFHMLWDDAKQRMLAEVKSWPYSFPASENFPKANERVNVSGR
FFVHDKYVTNEKVPANGSFIGLGPVGEAGSWQRDAKTYQFWTRTDDQGYFNITFVRVGEY
DLHGWVNGYVGDFKHKESIKITVGRNVDLGDLVFEPIRDGPTLWEIGVPDRLAKEFFVPD
PDPKYVNKLYVDHPDRFRQYGLWERYAELYPKDDLVYDVNASDYKKDWFYAQVTRKIGAR
YNGTTWQVKFNLNDVVPDGVYKLRLALASATNSDLEVRFNEPKPSPAIFTSGRIGNDNSI
ARHGIHGLYWLFNIDVKGSSLRKGNNTMFLTQTKGVSPFQGIMYDYIRLEGPSTPPK
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgcagaaacggctcgtcttagaccaaatacggcctcccaagagctacggccg
ccaccagcgcatggcaaatacgacttagctaaaaaaaaggcgatgcaacgtagagggaat
attataaaactagggtgtatttccatcatccttgtcctgtttctagcctttggaatttat
ggcgtagtcctattagtttcgttcaagaaggcggaaatgccacattttcaagtgaaatcc
gtacaagtatcgaaatttgacgtagccaacatttttatcagtcaacagaacgtattatct
accgatattgtgtttaatattgagtcggataacaaaaactctatggtcggagtagaatta
ggaaatatggtgatggaaacgaattggaatgagatgaatgcacatctaggcgaaacccat
gtcgtaaatgttgtccaaaagactaagggtgtgtctaagttacaggtttctacacatggc
gaggttgaattgtcgaaaaaagttgttaataaggaggatatgaagcttgaggttgtgctt
agtggaacccttaagtttttcaatggcgcgtttaagacgcagaaatatccgttcatggtt
acttgtaatgatatttctagtgcttcgtctaatgttggttgcgattccaaattatacacc
actggtaaacctccagagtcaacacgaaaaggtaagccaccaccagcgccacaaggagaa
aagtcggcccctgggacgcccgttgtagaagataagacaccaccttcgcctccaaaagac
tcgtttccacctgttaaagttaccatcctagataaatctgtaattttgagtaacgggttt
ctagaggcgacaatagccaaaccggcaggatatgtcaccggaatcaaatataatggaatc
gataacattcttgatacagtaaatcctgaggatgatagagggtattgggatgttgtttgg
gctcctcccggtacgaaaggaaccaaaggaaactttcaaaggattgtggcaaaagatttt
cgagtaatcatggaaaaaccagagcaaattgaattgtcatttaagttggcatataatcct
actactgatgctaacaaagctgcccccatggaaattgatcaaaggtatgtgatgctgcaa
ggagtatcaggaatatacgcgtatggtatctttgaaagagcggcttgggctcaatttggt
atgccaaatgcaagacttgctttcaagcttcaaagacaacagtttaagtacatggtgata
gcagataacagacaaagggaaatgccagtacctgaggaccgtatgaaacctcgaggacag
gagctagaatacccggaagcagtacttttagttgatcccattgatccgaaactgaaggga
gaggtggatgacaagtaccaatactcgatggagagtcaagatataagggtacatggttgg
atttgtaaagaccctccttcgggtttttggcaaatcactcctagctttgagtttcgctct
ggcggtcctaacaagcaattccttacttcccatgtcggtccatccaccctcgctatgttt
gtgagtgcacattattcaggagaggagctaataccaagatttcaagaaggagagccatgg
aatcatatatatggccctattttcatgtacatgaacaatctcaccaaaggagatgatttt
catatgctatgggatgatgctaaacaaaggatgttagctgaagttaaaagttggccttac
agctttccggcttcagaaaattttccgaaagcaaacgagcgcgttaatgttagtggtaga
ttttttgttcatgataagtatgtaaccaatgaaaaagtacctgctaatggttcattcatt
gggctaggcccagtgggagaagctggatcttggcaaagagatgccaagacatatcaattt
tggacacggacggacgaccaaggatacttcaacattacttttgtacgggttggcgagtat
gatctccatggttgggttaatgggtatgtcggagattttaaacacaaagaatccataaaa
attaccgtaggtcgcaatgttgatttgggagatcttgtgttcgagccaataagggatgga
ccaactctatgggaaataggtgttccagatcgtcttgcaaaggaatttttcgtccctgat
cctgatccgaagtatgtcaataagttatatgttgatcatcccgacagatttcgacaatac
ggattgtgggaaagatatgcagaattatatccaaaggatgacttggtttatgacgttaac
gcaagcgattacaagaaagattggttctatgctcaagttacaaggaaaattggtgcaaga
tataacggaactacatggcaagttaagtttaatttgaacgatgtggtaccagatggagtc
tataagttaagactagcacttgcatccgctactaattcagatttagaggtacgattcaac
gagccgaaaccaagtccagcaatatttacatcaggaagaatagggaatgataactcaata
gcaagacatggaattcatggactatattggctattcaacatagatgtcaaaggaagtagt
ctaagaaagggtaacaacacaatgtttcttactcaaactaagggagttagcccttttcaa
ggcattatgtatgattatattagacttgaaggtccatcaacaccacccaaatga
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