Silene latifolia (white campion): 141586359
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Entry
141586359 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141586359 isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
141586359
Enzymes [BR:
slaf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
141586359
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
IF3_N
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
141586359
NCBI-ProteinID:
XP_074263661
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Position
6:11958938..11964989
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AA seq
636 aa
AA seq
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MSFQAVQLQIQDHYVVIDNGILQMTISNPDGIVTKIVYNGIENLLEETNTEDNRGYWDLN
WSAAGSTGTTGFYERIAATSFSIVVEDEEMVEVSFSRTWDASYQGKLVPLNIDKRFIVLQ
GSSGFYSYAIYEKLKEWPGFNLAQTRIAFKLNKKWFRYMAVADDRQRDMPLPDDRLPERC
QTLAFPEAVLLTNPVEPEFKGEVDDKYQYSCENKDLQVQGWICKDPPTGFWQITPSDEFR
TGGPLKQNLTSHVGPTNLAMFISAHYAGEDMVVKFADGEPWKRVFGPVFMYLNGLPTGFD
WNWLWQDAKEQLFTETESWPYSFPASEDFPTSDQRGSISGRLLVYDSYSDEDYTPADGAY
VGLASGTEVNSWQLQSKGYQFWTKADESGYFYITDIRAGDYALCAWVPGFIGDFRSFSIS
ITAGCIIDMDDVVYKPPRDGPTIWEIGFPDRTAREFYVPDPDPNYVNKLYLNHPDRFRQY
GLWDRYTELYPNDDLVYTVGVSDCQKDWFFAQVTRKKDNTYIGTTWQIIFKLENVNQNGV
YKLRLALAMANQAELQVRVNDPKADPPVFTTGLIGHDNAITRHGIHGLYRLYTADIEGVK
LVQGDNTVFLTQSRGGSPFVGIMYDYIRLEAPPDSD
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtcattccaagcagtccagttacaaatccaggatcattatgttgtgatcgataatggt
atactacaaatgactatatcgaatcctgatgggattgtcacaaagatagtgtacaacgga
atagagaatttacttgaagaaacaaatacagaagataatagagggtattgggaccttaac
tggagcgcagctggatcaacgggaacaacaggattttacgagaggattgcagcaacgagc
ttcagtatcgtagttgaagatgaagaaatggtggaggtatccttctcgaggacatgggac
gcttcttatcagggtaaactcgtaccattaaacatcgataaaaggttcatagtgctccag
ggttcatcagggttctactcatacgctatctacgaaaaactaaaggaatggcctggattt
aatctcgctcaaactaggatcgctttcaagcttaataaaaaatggtttcgctacatggct
gtggcggatgacaggcaaagagacatgcctcttccagatgacaggttacctgaacgatgc
caaacgttggcttttcctgaagctgtgctgctcacaaacccggttgagcctgaatttaaa
ggagaggtggatgacaaatatcagtactcatgcgagaacaaggatcttcaagtccaagga
tggatatgtaaggacccgccaacaggattctggcaaattacgcctagtgatgagtttcga
actggtgggccgctcaagcagaatctgacctctcatgttggaccaacaaaccttgctatg
ttcatcagtgctcattatgccggggaagacatggtggtgaaattcgcggatggtgagcca
tggaaaagagttttcggcccagttttcatgtacttaaacggtctgcctacgggatttgat
tggaattggttgtggcaggatgctaaagagcagttgtttactgaaacagaaagctggcct
tactcttttcctgcttcagaagattttccaacatcggatcaacggggaagtatctctggt
agattactggtttacgatagttactctgatgaagattatactccagctgacggtgcatat
gttgggctagcttccggaactgaagtgaactcctggcaattacaaagcaagggctatcag
ttctggacaaaggcagatgagagtggatatttctacatcactgatattagagctggagac
tatgctctctgcgcttgggtacccggtttcattggagacttcagatctttctccatctct
atcactgcaggttgtattatagacatggatgatgtcgtgtacaaacctccaagagatgga
ccgacaatttgggagatcggctttcctgatagaacagcgagagaattctacgtccctgat
cctgatcctaactatgtcaataaattataccttaaccatcccgacagatttaggcagtat
ggtctgtgggatagatacactgagttgtatcccaatgacgatttggtttacaccgttggt
gtcagtgattgtcagaaagattggttctttgctcaagttactaggaagaaagacaacaca
tacattggaacaacatggcagattatcttcaaactcgagaacgtgaaccaaaacggagtc
tacaaactgagattagcacttgcaatggcgaatcaggcagaattacaggtgagagttaac
gatccaaaagcagaccctccagtatttactacagggctaataggacatgataatgcaatt
acaagacacgggattcatggactgtacaggctttacactgcagacatagagggcgtcaag
cttgtacagggcgataataccgtcttcttgactcagtctagaggtggcagcccttttgtt
gggatcatgtatgactacattcgccttgaagcaccacctgactccgattaa
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