Silene latifolia (white campion): 141586382
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Entry
141586382 CDS
T11116
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141586382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141586382
Ubiquitin system [BR:
slaf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
141586382
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GFIT
Motif
Pfam:
LRR_6
DUF7885
LRR_4
LRR_At5g56370
F-box-like
LRR_Zer-1
F-box
LRR_8
LRR_At1g61320_AtMIF1
RsmF_methylt_CI
F-box_4
Motif
Other DBs
NCBI-GeneID:
141586382
NCBI-ProteinID:
XP_074263692
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Position
6:12566753..12570749
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AA seq
373 aa
AA seq
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MAMQEGLRSEDLDSCFKKLMVFGAALGASPGDGGKLGGEMMADWKDIPMELLLRILTLVD
DKTVIRVSGVCSGWREAICLGLTRLCLSWCKNNMNEVVLTLAPKFTRLQTLILRQDKPQL
EDNAIETVASFCHDLRELDLSKSFKLTDRSLYALAHGCPNLTKLNISGCTAFSDDAVAYL
TSFCKKLKSLNLCGCVRAATDRALQAIAYNCRELQTLNLGWCENVSDSGVTSLAYGCPNL
RALDLCGCVLITDESVIALANRCPHLRSLGLYYCQNITDRAMYSLAQSRVRNKHGVWQSI
KPPRYEDDGLMNLNISQCTALTPPAVQAVCDSFPSLHTCPGRHSLIISGCLNLTSVHCAC
AIYSHRAPSTIAH
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgcaagagggtttaaggagtgaagatttggattcttgttttaagaagctgatg
gtgtttggtgctgctcttggtgctagtcccggtgacggtggcaagttgggtggtgagatg
atggctgattggaaggatattcctatggagttacttttgcggatacttactcttgttgat
gataagacagtgatcagggtttcgggtgtgtgtagtggatggagggaagcgatatgtctt
gggttgacgcgtctttgtctctcgtggtgcaagaacaacatgaacgaggtagtcctaact
cttgcaccaaagttcacaaggttgcagacattgatacttcgtcaagataaaccacaactt
gaggataatgctattgagactgtagcaagtttctgccatgatctccgggagctggactta
agcaagagtttcaagctaactgatcgttctttgtatgctttggcacatggttgcccgaat
ctaaccaagctgaacattagtgggtgcacagcttttagtgatgatgcagttgcgtatctt
actagtttttgcaagaagttgaagtcactaaatctatgtggatgtgtgagggccgctact
gaccgagcattgcaggccatcgcgtataactgcagagagcttcagactcttaacttgggg
tggtgtgaaaacgttagtgattcgggtgtcacaagtttggcttatggttgtccaaatctt
agagctcttgacctgtgtggctgcgtccttattacagatgaaagtgtgatagccctggca
aaccgatgcccacacctcaggtctctcggactgtactattgccagaacatcacagataga
gcaatgtactctttggcccaaagtcgagtgagaaataaacacggtgtatggcagtctatc
aaacctcctcgatatgaagatgacggcctcatgaacctaaacatcagtcagtgcaccgct
ctaaccccacctgcagtccaagcagtgtgcgattccttcccatcacttcacacttgtcct
ggacgacattctctcattataagcggttgcttgaatctcacgtcagtccattgtgcttgt
gctatttactctcaccgtgctccaagtacgattgctcactga
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