Silene latifolia (white campion): 141586384
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Entry
141586384 CDS
T11116
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141586384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slaf04131
]
141586384
Membrane trafficking [BR:
slaf04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
141586384
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
TreT_GT1
Motif
Other DBs
NCBI-GeneID:
141586384
NCBI-ProteinID:
XP_074263694
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Position
6:complement(12687039..12698942)
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AA seq
566 aa
AA seq
DB search
MVLVTAVRDYINKMLHDISGMKVLILDSVTVSVVSVVYSQSDLLKKEVFLVELIDSISMS
KESMSHLKAVYFLRPTSENVQHLRRQLASPRFGEYHLFFSNILKDTQIHNLADSDEHEVV
QQLQEFYADFVAGDPCHFSLNIRSNHLYMLPVAMDPSIMQQYCDRIVDGISTVFLAMKRR
PFIRYQRTSDIAKRIAQDTSDLMYQQESGLFDFRRTDTLLVILDRRDDPVTPLLNQWTYQ
AMVHELIGVQDNKVDLRPVGKHQKDQQEVVLSSEQDAFFKANMYENFGDIGMNIKRMVDE
FQQIAKSNQNIQTIEDMAKFVDNYPEYRRMHGNVSKHVTLVTEMSKIVEERKLMLVSQTE
QELACNGGQAAAFEAVTNLLYNDNVSDIDRLRLVMLYALRYEKESPVELMQLFNKLASKS
AKYKTGLVQFLLKQAGVDKRTGDLFGNRDLFNIARNMARGLKGVENVYTQHQPLLFQTME
NISKGRLKDVDYPFVGNHYPQSRPQDVVIFIVGGTTYEESRAVALLNSTNSGIRFILGGT
TILNSKRFLKDLEEAHKLIRSNNIVV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagttacggcagttcgagattacatcaataagatgcttcatgacatctccggc
atgaaagtccttatccttgattctgtcacggttagcgttgtcagtgttgtctatagccag
tcggacctactgaagaaggaagtgttcctggtagaattaatagactcaatatccatgtca
aaggaatccatgtcacatcttaaagccgtctactttcttagacctacatcagaaaatgta
cagcatttgagacgacagcttgctagtccgagatttggggagtatcacctttttttttcc
aacatattgaaggacacacagattcacaacctggctgattcagatgaacatgaagttgtg
cagcaacttcaggaattttatgcagactttgttgctggtgacccatgtcatttcagtctt
aacattcgttcaaaccacctttacatgcttccagtggctatggatccttcaattatgcag
caatattgtgatcgaattgttgatggaatttcaacggtttttttggcaatgaaacgtcga
ccctttattagataccagcgaacttctgatattgcaaaaagaattgcgcaggatacatcg
gatttaatgtatcagcaagagagtgggctttttgattttagaaggacggatacattgttg
gtcatattggacagaagagatgatccagttactccgctgctaaatcaatggacctatcag
gctatggttcatgagttgataggtgtccaagataacaaagttgatttgaggcctgttgga
aagcatcaaaaagaccagcaggaggttgtgctgtcttctgagcaagatgcttttttcaaa
gctaatatgtatgagaactttggagatattgggatgaatattaagagaatggtggatgag
tttcagcaaattgccaagagcaaccagaatatccagacaatagaggacatggccaaattc
gttgacaattatcccgagtacagaagaatgcatgggaatgtttcgaagcatgtgacactg
gtaacagaaatgagtaagatagttgaggagagaaagcttatgttagtttcacagacagaa
caagagctggcttgcaacgggggtcaagcagcagcatttgaggctgtgacaaatcttctg
tacaatgacaatgtgtctgatatagatcgtttacgattggttatgttatatgctttgcgc
tatgagaaggaaagtcctgtggaattgatgcaattgttcaacaagctggcgtcaaaatct
gcaaagtacaaaacagggcttgtgcagtttctcttgaagcaagcaggtgttgacaagcgt
acaggagatttatttggaaatcgagatctctttaatattgctcgtaacatggcccgtggg
ttgaagggtgttgagaatgtatatacccaacatcagcctcttctattccagactatggaa
aacatttccaagggccggttgaaagatgttgactacccatttgttggaaatcattatccg
cagagcagaccacaagatgtcgtcatttttattgttggcggaacaacttatgaggaatca
cgtgctgttgctctgttaaattccaccaattctgggattcggtttattctgggaggcaca
acgattctcaattccaagaggtttttgaaggaccttgaagaagctcataagctaatccgg
tctaacaacattgtagtttga
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