Silene latifolia (white campion): 141586833
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Entry
141586833 CDS
T11116
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141586833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slaf03041
]
141586833
Spliceosome [BR:
slaf03041
]
Complex A
Other components
Complex A specific factors
141586833
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
zf-CCHC
zf-CCHC_4
PHD_4
KH_PNO1_2nd
RapA_C
RRM_7
Motif
Other DBs
NCBI-GeneID:
141586833
NCBI-ProteinID:
XP_074264315
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All DBs
Position
6:63183424..63187601
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AA seq
668 aa
AA seq
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MEPQTLSESLPPLSSSPSQLDPPSSLPQTLDSNPPLNHQNGNTTVLSAVSGGATTTTDNQ
NPQSGGEEETTSKRRKRRSRWDPPPSEAPDSGNDTSGTGRKRKSRWADDEPKPVIQLPDF
MGGIEFDPEVQALNSRLLEISRKLQSGLPLDDRPEGARSPSPEPVYDNMGIRVNTREYRA
RERLNRERQEIISEIIKKNPAFKPPADYRPPKRYKKLYIPQKEYPGYNFIGLIIGPRGNT
QKRMEKETGAKIVIRGKGSVKEGRFQQKQNSKPDPSENEDLHVLVEADTQEAVDAAAGMV
EKLLQPVDEVLNEHKRQQLRELAALNGTIRDEEFCRVCGEAGHRQYACPSRLTTFKSDVL
CKICGDGGHPTIDCPVKGTTGKKMDDEYKNFLAELGGGPGTEEGSGGGGGGSSHPGLGLN
VGKGSSKELDETNLYIGYLPPNLEDEGLISYFSAFGEIVMAKVIKDRGSNISKGYGFVKY
ANVEQANAAIAGMNGKSIDGRTIAVRVAGRLPQPAPPSSQPPSGPPAPYSGPVTYPSQQY
QSGGPYGAPVPWGPPPPYGAYPPPPPGSGYYPPPPPLPSYALPPGDPYGGSPASMAPPPP
PSYLGSSYAYQPYYGAPPPPPPPSTDQPQVLANVPWASNPVPPLSAPAAEQAAQGADAEY
EKFMAEMK
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaacctcaaactctctctgaatccctacctcctctttcatcttccccatctcaatta
gatcccccttcttcccttccccaaaccctagattcaaatccccctctaaatcatcaaaac
ggcaacacgacggtactatccgctgtaagcggcggcgctactacgacaactgacaaccag
aatcctcaatccggcggagaagaggagaccacgagcaaacgccgcaagcgccgcagccgg
tgggatccgcctccgtcagaagctcctgattccggcaacgacaccagcggaactggtcga
aagagaaagtcacggtgggccgacgatgaacccaaacctgtcatacaattacccgatttc
atgggtggtatcgaattcgatcccgaagttcaagctcttaattccagattacttgaaatc
agccggaagttacagtccggtttaccactagatgatagaccggaaggcgcgagatcccca
tcacctgaaccggtttacgataacatgggtattagagttaatacacgagagtatcgcgct
cgcgagaggttgaaccgggaaagacaagagataataagtgagattattaagaaaaacccg
gcatttaaaccgccggcggattaccggcctccgaaacgatacaagaagctttatatcccg
cagaaggaatatcctggttataatttcattgggttgataatcgggccgagggggaacaca
cagaaacgtatggagaaagaaaccggggcgaaaatcgtgattaggggaaaggggagtgtg
aaagaagggagatttcaacagaagcagaactcgaaacctgacccgagtgagaacgaggat
ttacacgtgttggtggaggcggatacgcaggaggcagtggacgcggcggcagggatggtt
gagaagttgttacagcctgtagatgaggtgttgaatgagcataagaggcagcaacttagg
gagctagctgcattgaatggaacaattagagatgaggagttttgtagagtgtgcggcgag
gcggggcatagacagtatgcttgtccctcgagattgacgacgtttaaaagtgatgtgttg
tgtaagatttgtggtgatggtggtcaccctactattgattgtcctgttaagggtaccact
ggtaagaagatggatgatgagtataagaactttttggctgagttgggtggcggtccggga
actgaggagggctcgggtggcggcggtggtgggagtagtcatccggggttggggttgaat
gtgggtaagggtagtagcaaggaacttgatgagaccaatttgtacattgggtatctgccc
ccgaatcttgaggatgagggtttgataagctatttttcggcttttggggagattgtaatg
gctaaggttattaaagatcgtggtagtaatattagtaaaggttatgggtttgttaagtat
gccaatgttgaacaggctaatgctgctattgctggtatgaatggcaagagtattgatggt
aggacgattgcggtccgggttgctggcagactgcctcaaccagctccgccttcgtctcag
cctccttctggccctccagcgccttactcaggtccagtaacatacccgtctcagcagtac
caatctggtggcccttacggggctcctgtcccgtggggtccacctcctccgtatggtgca
taccctcctccaccacctggttcaggttattaccccccaccaccaccactaccgtcttat
gctctgccaccgggcgatccttatggtggttctcctgcctctatggcccctcctccccca
ccttcgtatttagggtcgtcttatgcgtaccagccttattatggggcaccgccacctccc
cctcctccatccacagatcaaccacaggtattggcaaatgtgccttgggcatccaatcct
gttccgccattatctgctcctgctgcagagcaagctgctcagggagctgatgccgagtat
gagaagttcatggcagagatgaaatga
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