Silene latifolia (white campion): 141586848
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Entry
141586848 CDS
T11116
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27-like isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
slaf01002
]
141586848
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slaf04131
]
141586848
04121 Ubiquitin system [BR:
slaf04121
]
141586848
Enzymes [BR:
slaf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
141586848
Peptidases and inhibitors [BR:
slaf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
141586848
Membrane trafficking [BR:
slaf04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
141586848
Ubiquitin system [BR:
slaf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
141586848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
141586848
NCBI-ProteinID:
XP_074264341
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All DBs
Position
6:67240480..67253015
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AA seq
573 aa
AA seq
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MRVQPVAKLGASRDTRLFRWNRMKIKGDISVKSLLWKIRSGFEMLSQIKWVSRHGAHLSM
ASIVAAIGLHFVLRDGTLGNLSNLLVYDRDTSSEKLWFVPGLRNLGNNCFLNAVLQSLAS
CSSFRRFLDELKEFQLLSNEGQVEDFPLMMSLATLVEELGALKDRSSSLNPKKVMSAMQD
YIPQFQLANQQDSAEALLHLLSCLRDELSDSLTPNCGSLADLDIPTSRIFDIETIHNVNE
IRRWREQYLGPFDGVLSSFLTCHTCSSEILMDSGFFHTLPLSLMSNTKTSVLGKFTLEDS
IKRFLSPELVENYSCSHCWHIAASKYLTSIEGKQAKICNLRCCAAQEFCDCKNLPSLKSL
PWSNRFSHTIKQLHIACFPQILCLQLQRTSLNLFGELVKIQGHISFPLILDLSPFAKYEF
DIHKRKVNETKIRGEQLLPSSTYNPRIFDICLNPMKVKDEAPQISPQECSLQNATCSNNI
SVPTATDKVFNDTMPSKAQLYRLVAAVEHFGKAGSGHYTVYRGVRAQIEEGHVDGGINKL
PMQWFHISDSNVHHASEEDVLGAEASLLFYERI
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgcaacctgtggcgaaattaggggctagcagggacactcgcctgtttcgttgg
aatcgtatgaagattaaaggagatattagtgttaaatcattgttgtggaagatcagaagt
gggtttgagatgttgtcacaaattaaatgggtttcgcgtcatggtgctcatttatcaatg
gccagtatcgtggctgccattggtcttcactttgttttaagagacggaacacttggtaat
ttgtcaaatttgttggtttacgatagagatacatcttctgaaaaactatggtttgtgcct
gggttgcgaaatttaggcaataattgttttctcaatgcagttttacagtcactggctagc
tgttcgagttttaggcgttttcttgatgaactcaaggaatttcagttattgtccaacgaa
ggccaagttgaagattttccccttatgatgtctttggctactttagtagaagaacttggc
gcattgaaagatagaagtagctccctgaaccccaaaaaagtaatgtcagcaatgcaagat
tatatcccacagttccaattggcaaatcaacaggattcagcggaagcacttcttcatctt
ctctcatgtctaagagatgaattatcagattctcttacgccaaattgtggctccttggca
gatttggatatccctacaagtcgcatttttgatattgagacgatacacaatgtaaatgag
ataagaagatggcgggagcaatatctggggccttttgatggtgttcttagcagtttcctg
acgtgccacacctgttcttctgagattctgatggactctggtttcttccatacgttgccc
ctctcactaatgtccaacactaaaacctctgtactgggtaaattcacactagaggattcc
ataaaaaggttcctgtctcctgaacttgtcgagaactactcttgtagtcattgctggcac
attgctgcctctaaatacttgacttcaattgaaggaaagcaggcaaagatatgcaacttg
agatgctgtgctgcgcaagaattttgtgattgcaagaacttaccatcgctaaaatccctt
ccttggtcaaatcgtttttcacatactatcaagcaactccacattgcttgttttcctcag
attctctgccttcagctgcaacgcacttcattgaacttattcggggagcttgtgaaaatc
cagggccacatttcttttccattgatcttggatttgtcaccattcgcgaagtatgagttt
gacatacacaagcgaaaggtaaatgagacaaagattcgaggagaacagctcttgccctca
tccacctataatcctcgtatttttgacatatgcttaaatccaatgaaagtcaaggacgag
gctccacaaatttctcctcaggagtgttctctacaaaatgcaacttgctctaacaatata
tctgtgcctactgcaactgataaggtttttaatgatacaatgccttcaaaggcccaattg
tatcgcctcgttgctgctgtggaacactttggaaaagcaggcagtggtcattacacagta
tacagaggggtgagagctcaaatagaagagggtcatgttgatggaggaatcaataaactt
cctatgcaatggtttcacatttcagactcaaatgtacatcatgcttcggaagaagacgtt
cttggtgcagaggccagtctgcttttttatgagagaatttaa
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