Silene latifolia (white campion): 141586995
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Entry
141586995 CDS
T11116
Name
(RefSeq) lethal(2) giant larvae protein homolog SRO77-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slaf04131
]
141586995
Membrane trafficking [BR:
slaf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
141586995
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
141586995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
WD40_WDHD1_1st
WDR55
Beta-prop_WDR36-Utp21_1st
Synaptobrevin
Beta-prop_WDR5
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
141586995
NCBI-ProteinID:
XP_074264505
LinkDB
All DBs
Position
6:93158836..93175871
Genome browser
AA seq
1083 aa
AA seq
DB search
MFAKKLLNKATHHHHHQHHQREDQHGNLRQDDFDIQILSHLGIPITGSILDVDPLQQLLA
IGTLDGRIKVLGGDSIEGLLISPKQLPYKNLKFLQNKGYLVGIVNDNDIQVWNLESRSLS
CSLQWESNITAFSVISGSLFMILGDEFGEVSILKYAPEGGKLVQMPYRISPHIITEKTGI
IIPTDQPVAGVLPQPSYFGDRILIAYQYGLIILWDVITAEVVVFKGDKDLLIKGHLSDSS
RKLDVDPLNNALEDMYEKEISALCWASSIGSILAVGYIDGDILLWDLRAPFKCNKTGDSF
NDVVKLQLSSAEKRLPVIILHWSEVNVSQNSSSGQLFVYGGCEIGSEEAITVVSMKWSPG
METLKSVSRVDLAVHSAFADMVFLSSLGTPAKGQYDGLFVLTRPGELQFYDMKFLSSLAS
QHERKSHASGVKFHVAIPTTDPQMTATKLSSHAYDGNVSAWLLEITSFGSTLSPGKCTKW
PLTGGTWNEGSSADEKPEKRIYIAGYKDGTVRVWDVTKSTFSLVSYLEGQVPGIENVGSN
ISVTSLDFCESTMNLAVGSECGAVRVYSLTSGGGTKLHWVKHSEQKVYDMPSSKGPHCKA
VFSLVNARVQSLQFSLSGIKLAVGFESSHVAVLDMRSLSVLFFTDSVASSTSPIISAILK
TFSDVYEFSEGSKHMGSKHTEQPSGELVFTVTQDSKVNVLDSRTGSTITTRPLHLKKEHK
AISIYVLEESEFSSKSPNTSESRGTEHFYNGEKLMDSLLLLCCEDVLRLYQMRSVIQGDD
KPVCKVNLAKSCCWTSILRKDDKIGLILVYLSGTVEIRLLPSLELLLESSINSALRWNFR
SNMENLTSSTDQGLISLVNGGEVVFFSLSTGENETIFRESLPLLHDKVMSTAADAAISYS
IKHKKQVAASGILGGIVKGLKKESKNTNDPPSLTNFLQLERIFSHPVVTDSSLTTLEYKE
EEEVEELDIDDIEIDEPILPAATSSNQAKGKATGKLKDSLFEGKHMDMKPKTRTPEEIMA
AYRGAEYASAAAERAKNKLLERQEKLERIGQRTEDLRNEAEDFASMAHELAKTMESRKRW
WKI
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccaaaaagttattgaataaagccactcatcaccaccatcatcaacatcatcag
cgggaagatcaacatgggaatcttaggcaagatgattttgatatacaaattctgagtcac
cttggcattcctataactggatctattcttgatgttgatccacttcagcaattactggcc
attggaacgcttgatggtaggatcaaagtacttggaggagacagtattgaaggtctttta
atatcccctaaacaattgccttacaaaaatttgaagttcctgcaaaacaaaggttatttg
gttggaatcgtgaatgataatgatattcaggtctggaatttggagagcagatctctgtcg
tgtagtctgcagtgggagtccaatataactgctttttctgtaatttctgggtccctgttc
atgatattaggagatgagtttggagaagtctcaattttgaagtatgctcctgaaggtgga
aaacttgtacagatgccatatcgtatttctcctcatataattactgagaagactggcatc
attattcctactgaccaacctgttgctggggttcttcctcaaccttcttattttggtgac
agaatattgattgcataccaatatgggttaatcattctgtgggacgttattacagctgag
gttgtagtctttaaaggcgacaaggatttacttattaagggtcacttgtctgattcgtct
cgtaaattagatgttgatccactcaacaacgcacttgaagatatgtatgaaaaagaaata
agcgctctttgctgggcatcttcgataggatcaatccttgctgttggatatatagatgga
gatatattactttgggatttacgagctccatttaagtgtaataaaactggtgattcattc
aatgatgttgtaaagcttcagttatcttcagctgaaaagaggcttcctgtcattattctg
cactggtctgaggttaacgtatctcagaacagctccagtggccaactttttgtttatggt
ggctgcgaaattggatctgaagaagctataacggttgtgagcatgaagtggtctcctggc
atggaaactttaaaaagtgttagccgtgtggaccttgccgtgcatagtgcttttgcagac
atggttttcttatcttctcttgggacgcctgcaaagggtcaatatgatggcctttttgta
ttgacaagacctggcgagttgcagttttatgatatgaagtttttgtcttctttagcttct
cagcatgagagaaaatcacatgcatcaggtgttaaatttcatgtggcaatccccactact
gatccacaaatgacagctaccaaactcagctcacatgcatatgatggaaatgtgtcagcg
tggttgttggagataacttcatttggttcaacactgagcccaggtaaatgcacaaagtgg
ccattaacagggggtacatggaatgaaggttcatctgctgatgaaaagccagagaaaaga
atatacatagctgggtacaaagatggaactgtccgagtttgggatgtaactaaatcaaca
ttttcactggtgtcctatttagaaggtcaggtgcctggcattgaaaatgtgggttcaaat
atctccgtgacatcattagacttttgtgagtcaacaatgaatttggctgttggatccgag
tgtggtgcggttcgtgtttacagcctgactagtgggggtggaacaaagcttcactgggtg
aaacattctgaacagaaagtttatgatatgccatcaagtaagggacctcactgcaaagct
gtattctcgctggtgaatgctcgtgtgcagtcacttcagttttctctgtctggaatcaaa
cttgctgtggggtttgaaagcagtcatgtagcagttcttgacatgcggtctctatcagtt
ctgttttttacagactcagtagccagctctacatctccaatcatttcagcaattctaaag
acgttttcagatgtgtatgagttcagcgaaggatccaagcatatgggatccaaacataca
gagcagcctagtggagaattagtattcactgtcacccaagattcaaaagtgaatgtcctg
gattctaggactggtagcactatcaccacacgtcctttgcatttgaagaaagagcataaa
gcgattagcatatatgtcttagaggaaagtgagttctcgtctaaatctccaaatacaagt
gaatcaagaggcactgagcacttctacaatggagaaaagttaatggattcactgcttttg
ctatgttgtgaggacgtgcttcgtttataccaaatgagatcagtgattcagggtgacgat
aaacctgtttgcaaggtgaacctcgcaaaatcttgttgctggacttccatcctcagaaaa
gatgacaaaattgggcttatcttggtctacctgtctggaactgttgaaataagattgctt
ccaagcctagagctgctgctagaaagctccataaattcagctctaaggtggaattttaga
tcaaacatggagaatttgacaagttctacagatcaagggcttatcagtctggtgaatggg
ggcgaggtagttttcttttcattgtctactggtgaaaatgaaacaatatttagggaatcg
ttacctttgcttcatgacaaagtcatgtctactgctgctgatgctgctatttcctactct
atcaaacataagaaacaggttgctgcatcaggtattctgggtggtatcgttaagggatta
aaaaaggaatcaaaaaatacaaatgatcctccttctcttacaaactttctccaactagag
aggatattttctcatccagtagttaccgactcatctttaaccaccttagaatataaggaa
gaagaagaagtcgaggagcttgatatagatgatatcgaaattgatgagcccatattgcca
gctgcaacttcttccaatcaggcaaaggggaaagcgactgggaaactcaaagacagtctg
tttgaaggcaagcatatggatatgaaacccaaaaccagaaccccagaagagattatggca
gcatataggggagctgagtatgcgtctgctgctgctgaacgtgcaaaaaacaaacttctg
gaacggcaagagaaacttgagagaatcggccaaagaacagaagatctccgaaatgaagca
gaagattttgcatcaatggctcatgaacttgcgaaaacaatggaatcacgtaagaggtgg
tggaagatttga
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