Silene latifolia (white campion): 141587427
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Entry
141587427 CDS
T11116
Name
(RefSeq) ABC transporter F family member 3
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
slaf03012
]
141587427
Translation factors [BR:
slaf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
141587427
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
PWI_ABCF3
AAA_21
SMC_N
AAA
AAA_16
AAA_28
NACHT
AAA_29
AAA_22
nSTAND3
nSTAND_NTPase5
AAA_15
RsgA_GTPase
DUF5906
MMR_HSR1
AAA_25
AAA_18
ORC-CDC6-like
AAA_23
Motif
Other DBs
NCBI-GeneID:
141587427
NCBI-ProteinID:
XP_074265015
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All DBs
Position
6:140577162..140585680
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AA seq
718 aa
AA seq
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MSVEVASRVVHEVLGPGIEEVDQPIVDYIVNVLADEDFDFGVEGDGVFDALGELLLDVGC
VSDFSHCRSVCGKLCDKFGKHGLVKPKPSVRSLAAPVRMFDGMDEEEAPKKKVEEIDGPL
LTERDKMKIERKKRKDERQREAQYLQHVAEMEAVRAGMPKVCVNHGQDVGGPNIKDFHLD
NFNISVGGRDLIVDGAVTLSFGRHYGLIGRNGTGKTTFLRHLALHAIDGIPKNCQILHVE
QEVVGDNTTALQCVLNSDIERNQLLEEETRLLEQQRNYELEEANGKSNTELNGNLSKDAI
TERLQEIYKRLELIDADSAEARAASILAGLSFSPEMQLKPTKTFSGGWRMRIALARALFI
EPDLLLLDEPTNHLDLHAVLWLESYLVKWPKTFIVVSHAREFLNLVVTDIIHLQGQKLTS
YKGDYDTFERTREEQLKNQQKAFESNERSRAHMQNFIDKFRYNAKRASLVQSRIKALDRM
GFVDAVVNDPDYKFEFPTPDDRPGPPIISFSDASFGYPGGPLLFKNLNFGIDLDSRIAMV
GPNGIGKSTILNLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYLMRCFPG
VPEQKLRGHLGSFGITGNLALQPMYTLSGGQKSRVAFAKITFKKPHLLLLDEPSNHLDLD
AVEALIQGLVMFQGGILMVSHDEHLISNSVDELWVVKQGTATPFQGTFQDYKKILRSS
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttgaagtggcgagcagggtggtacacgaggtgttaggtcctggaattgaagag
gtcgaccaacctattgttgattacatcgtgaatgttctcgccgacgaggacttcgatttc
ggcgtcgaaggcgatggcgtttttgatgcactcggtgaactcctcctcgacgttggctgc
gtttccgatttctcccattgtcgctctgtgtgtggcaaactatgtgataagtttgggaaa
catggattagttaagcctaaaccaagtgtgagaagtctagctgcacccgttaggatgttt
gatgggatggatgaagaggaggctcccaagaagaaggttgaggagattgatggtccgctt
ctcactgagcgtgacaaaatgaagattgaaaggaagaaaaggaaagacgagcgccaaagg
gaggctcaatacctacagcatgtcgcagaaatggaagctgtcagagcaggaatgcctaaa
gtgtgtgttaaccatggacaagatgttggcggaccaaatatcaaagatttccacttggat
aacttcaatatttctgttggaggaagggatcttattgtcgatggtgctgtcactctttct
tttggaaggcattatgggctcattggaagaaatggtaccggtaaaacaaccttcctcagg
cacctcgctttacatgcaattgatggtattcccaaaaattgccagatactgcacgtggag
caagaagtagtgggggacaatacaactgccttgcagtgtgtgctcaattctgatatagaa
cgaaaccagcttttggaggaagaaacacgtctattagaacagcagagaaattatgagctt
gaggaagctaatggcaaaagtaacacagagctgaatgggaatctttccaaagatgccatc
acagaaagactacaagagatatacaaaagactagaattaatcgatgctgattctgcagag
gcgcgagcagcttctatccttgcgggtcttagtttctcaccagagatgcaactcaagccg
acaaaaaccttttctggaggatggcgaatgcgcatagctcttgcacgtgctctttttata
gagcccgatttattacttcttgatgagccaacaaatcatcttgatctgcatgctgtgctg
tggttggaatcctaccttgtgaagtggccaaaaacgttcatagttgtatctcatgctcga
gagtttttgaacttggttgttactgatatcatacatttacaagggcagaagctgacatcg
tataaaggggattatgacacatttgagaggacacgcgaagaacaactaaagaatcaacaa
aaagcctttgagtcgaatgaaagatccagggctcatatgcagaatttcattgacaaattt
cgctacaatgccaagcgtgcctcacttgttcaatctaggatcaaggcattggaccgcatg
ggcttcgtagacgctgtagttaatgatcccgattataaatttgaatttccaacccctgac
gaccgaccaggcccgccaattataagcttcagtgatgcatcctttggctatcctggtggt
ccgttattgttcaagaacctaaactttggaattgatcttgatagccgtattgccatggtt
ggtcccaatggtattggaaaatctacaatactaaatttgattgccggggagttgcaacca
agctcaggaactgttttccgctcagcaaaggtccgtattgctgtattcagtcaacatcat
gttgatggacttgacttatcctcaaatcctcttctctatctgatgcgctgcttcccgggt
gtacctgaacagaagttgcgtgggcatttaggttcatttggtattactggtaatctggca
ctccagccaatgtacaccttgtctggtggtcagaaaagtagagtggcatttgcaaagatt
acttttaagaagccacacctgttgttgcttgatgaaccatcaaatcatcttgatctggat
gctgtggaggcactcattcagggtcttgttatgttccaagggggcatattaatggttagt
cacgatgagcaccttatatcaaacagtgtagatgagctgtgggtagttaagcaagggaca
gcgacgccattccaaggcacattccaggattacaagaagatactgcggtcatcttga
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