KEGG   Silene latifolia (white campion): 141588115
Entry
141588115         CDS       T11116                                 
Name
(RefSeq) ras-related protein RABG3a-like
  KO
K07897  Ras-related protein Rab-7A
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf04142  Lysosome biogenesis
slaf04144  Endocytosis
slaf04145  Phagosome
slaf04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    141588115
   04145 Phagosome
    141588115
   04142 Lysosome biogenesis
    141588115
   04148 Efferocytosis
    141588115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:slaf04131]
    141588115
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:slaf04147]
    141588115
   04031 GTP-binding proteins [BR:slaf04031]
    141588115
Membrane trafficking [BR:slaf04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    141588115
Exosome [BR:slaf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   141588115
  Exosomal proteins of other body fluids (saliva and urine)
   141588115
  Exosomal proteins of colorectal cancer cells
   141588115
  Exosomal proteins of bladder cancer cells
   141588115
GTP-binding proteins [BR:slaf04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    141588115
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA ATP_bind_1 Septin RsgA_GTPase AAA_16 AAA_22 AAA_24 nSTAND1 IIGP nSTAND3 AAA_7 AIG1 Sigma54_activat
Other DBs
NCBI-GeneID: 141588115
NCBI-ProteinID: XP_074265671
LinkDB
Position
6:57701847..57704993
AA seq 214 aa
MSSYTPSQDTLLKVIVLGDSGVGKTSLINTYVHKKFKLQFKPTIGADVVAKKLQVDGKKV
SLQIWDTAGQERFQSLGPAFFRGADACVLVHDVNVQKSFDSLQTWYHEFIKQTDISDPTK
FPFVVIGNKIDLDNGASRAVTTKRAKEWCASIGGEPDAVPYFETSAKENVNVDEAFLDIA
KVALSKGHAQDIYYESMVGSLSEIEEAQSGGCPC
NT seq 645 nt   +upstreamnt  +downstreamnt
atgtcgtcgtatacgccttcacaagatacattgctcaaggttatagtccttggtgattct
ggggttggcaagacctcattaattaacacatacgtgcacaaaaagttcaaactacaattc
aagccaacaattggtgcagacgttgttgcaaagaaattacaagtagatggcaaaaaagtc
agtcttcagatttgggacacggccggacaagagaggtttcaaagcctaggaccagcattt
tttagaggagcagatgcttgtgtcttagtgcatgatgttaatgtacagaaatctttcgat
tcacttcaaacttggtaccatgaattcatcaaacagacggatatctccgatccaactaaa
tttccgtttgtagtaattggaaacaagattgatctagacaatggtgctagtcgtgcggta
actacgaagagagcaaaagagtggtgcgcctccataggaggagaacctgatgctgttcca
tactttgagacttcagctaaggaaaatgtaaatgtagatgaagcatttcttgatatagca
aaagttgcactttccaaaggccatgctcaagatatatactacgaaagtatggtggggtct
ctttcagaaattgaagaagcacaaagtggcggatgtccatgctag

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