Silene latifolia (white campion): 141589767
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Entry
141589767 CDS
T11116
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141589767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141589767
03036 Chromosome and associated proteins [BR:
slaf03036
]
141589767
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141589767
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
141589767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
141589767
NCBI-ProteinID:
XP_074266493
LinkDB
All DBs
Position
7:15126277..15132677
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AA seq
969 aa
AA seq
DB search
MKIVFGQAASGFSVTMSNSGDKTNPSYNPFAVNTTDKNNASVPVFGSTGNSGHNPFSVNT
NGNASTSAFGNMTNSIHNPFAVNTTGNASMSGFGNPNNSAPNPFAVNTTGNASVSSFGNR
NNSSSNPFANNTNGNASLSTFGNMTNATHNPFAVNTTGNASVSVFGNPSNPAPNPFAVNA
NGNASMSNFGNPSNPTPNPFALNTNGNATFGNTSNPPPNPFAVKPPENSPMPMFWNTNST
CNPFAGNTFSNTTSPSFPFRGITFEGTSTGQFGAPPSSVLTSPLTFGVPAAPAETSGTPA
AFTNHMRNNAFGWGPGGSAPSSFSQSSGLKFGPSSNSLFGTIGLMTSTSAGTNISVSNAG
SFSLGSTKPCSSPQFSFGLNKGSKIKPYAATKNPEDSKEQFLSISSMPVYKSKSHEELRW
EDYELKSGGTPTTVSTGSFPCPVSQFPISNITPTALNPFSPSPIPSLNFTPSNPTTAASL
SNSAPSSTTTPVFTLPSSPFQTPSFPKQDPSSNSTPSTNITSVFNQPPSSVLNTSFTSLT
PLSNSNPWPFTQLSTLNSIPANPLNLIPPSTSTPSFTKPTDSGNSVPNTSFPTPNPSFNF
TAPSLIQPSTSNPWALTQPSTLTETGKSQINPAPSALASYNSPGNHGGSTDKAVDCIIAV
KDPFGPQSVSSHPLTDYCICSPLIQNGISGMPVIDKPATTRVSSLVTSRHIPQRPLTMRA
RKYNPKSDGPKVPFFDHIDETPSTQKESTFIIPRENPRSVFEATPNLSGVSCVKAAITDA
STSLHDLRLKSKTDEASSSTPCNLESQKSVNEKWQQVNPSASVPKLQRPDYYTQPSIQEL
LSAESNDPGFCSHVQDFVVGRHGYGEVKFEGETDVRGLDLDALVSFNKREVIVYEDEHEK
PEIGEGLNKQAEVTLLNVKCSDKTGKEYKSGKMVDKFLEKLKKVAEEQGAEFVSYDAVNG
VWKFQVQHF
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagtgtttggacaagctgcttctggtttttcagtgacgatgtcgaattctggg
gataaaaccaatccatcctataatccttttgctgttaatacaactgacaaaaacaatgca
tcagtgccggtatttgggagtacaggcaattcaggtcacaatccgttctcagttaataca
aacggcaatgcatcaacgtcagcttttgggaatatgaccaactcgattcataatccattt
gctgttaatactactggcaatgcctcaatgtcgggctttgggaatccaaataactcggct
cccaatccttttgctgttaatacgactggcaatgcttcagtgtcgagctttgggaatcga
aacaactcgagttctaatccttttgccaataatacaaatggcaatgcatcattgtcaacc
tttggaaatatgactaatgcgactcataatccatttgctgttaatacgactggcaatgct
tcagtgtcagtctttgggaatccaagcaacccagctcctaatccttttgctgttaatgca
aatggcaatgcatcaatgtcgaactttgggaacccaagcaaccctactcctaatcctttc
gcattaaacacaaatggcaatgcgacctttgggaatacaagcaacccacctcctaatccc
tttgctgttaaaccacctgaaaattcgcctatgccaatgttttggaatacaaactcaact
tgtaatccttttgccggtaacacatttagcaacacaacttccccaagttttccatttcgg
gggatcacttttgaaggaacttcaactggacaatttggagcaccgccatcctcagtttta
acttctcctttgaccttcggagttccagctgcccccgcagaaacttctggtacacctgca
gcattcaccaaccatatgcgtaacaatgcctttggttgggggcctggtggaagtgcacct
tcgtctttttcacagtcgtcaggattaaagtttgggccgtcttcaaattctctctttggt
actatagggcttatgacatcaacatctgctggtacaaacatatctgtttcaaatgctgga
tcatttagtcttggttctacgaaaccttgcagtagtccgcaattttcatttggtctgaat
aaaggaagtaagatcaaaccgtatgcagccaccaagaatccagaggatagcaaagaacaa
ttcctttcaatctctagtatgcccgtttataaaagtaaatctcatgaagaattgagatgg
gaggattatgagcttaaatcaggaggcactcctactactgtttcgacagggtcatttccc
tgtccggtttctcagtttccgatatcaaacataactcctactgctttgaaccctttctcc
ccaagtccaattccgtcattgaatttcactccatctaatcctactactgcagcttcactg
tcaaattctgccccatctagcaccacaacaccagtattcactctcccttcatcgcctttt
caaaccccttcctttcccaaacaagatccatcatcaaactcaactccatctaccaacata
acatcggtgttcaatcaacccccatcttctgttctgaatacttcctttactagtctaacc
ccattatcaaattcaaatccatggccgttcactcagctatcaacactcaactccatcccg
gctaaccctcttaatctaattccgccctcaacgtcaactcctagcttcactaaacccacc
gacagtggaaattctgttcccaatacttcctttcctactccaaacccatcattcaatttt
acagcaccatcactcatccaaccctcaacttcaaatccatgggcgttaactcagccatca
acactcactgaaactggaaagagccaaataaatccagcaccatcggctttggcatcctat
aattctccaggcaaccatggtggttcgactgacaaggcggttgactgcattatagctgtt
aaagatcctttcgggcctcaatctgtatcctctcaccctttgacagattattgcatctgc
tctccattgattcaaaatggaatatctggcatgcctgtgattgataaaccagcaacaacc
agagtttcatctctcgttacctcaagacatatccctcaacgaccattgacaatgcgtgcc
aggaaatacaatcccaaaagtgatgggccaaaggttccgttctttgatcacattgatgaa
acaccgagtacccaaaaggagtctacttttattattccaagggagaatcccaggtcggtg
tttgaggctacccctaatctgtccggtgtcagctgtgtcaaagccgccatcactgatgca
tctacttcgctacatgatcttagactcaaatctaagacagacgaagctagcagttccacg
ccctgcaacttggagagtcaaaaatcagttaacgagaaatggcaacaggtcaatccatca
gcatcagtgccaaaactccaacgacctgattattacacacagccatcaatccaggaacta
ctatcagctgaaagcaatgaccctggattttgcagtcatgtacaggattttgtggtgggc
cgacacgggtatggagaggttaagttcgaaggggagacagatgtacgtgggctggacctt
gatgctcttgtatccttcaataagcgggaggttatcgtctatgaggacgagcatgagaaa
cccgagattggagaaggccttaataagcaggccgaggttactctcctgaacgtaaagtgc
agtgacaagacaggaaaagaatacaagagtgggaagatggtcgataagtttttggagaag
ctgaagaaagtggctgaagaacagggagctgagtttgtgtcctatgatgctgttaatggt
gtgtggaagtttcaggttcagcatttctag
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