Silene latifolia (white campion): 141589856
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Entry
141589856 CDS
T11116
Name
(RefSeq) heat shock cognate 70 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03040
Spliceosome
slaf04141
Protein processing in endoplasmic reticulum
slaf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141589856
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
141589856
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141589856
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slaf01009
]
141589856
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slaf03041
]
141589856
03009 Ribosome biogenesis [BR:
slaf03009
]
141589856
03110 Chaperones and folding catalysts [BR:
slaf03110
]
141589856
04131 Membrane trafficking [BR:
slaf04131
]
141589856
03051 Proteasome [BR:
slaf03051
]
141589856
03029 Mitochondrial biogenesis [BR:
slaf03029
]
141589856
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slaf04147
]
141589856
Protein phosphatases and associated proteins [BR:
slaf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
141589856
Spliceosome [BR:
slaf03041
]
Complex B
Other components
Prp19 complex
141589856
Complex C
Prp19-CDC5 complex
141589856
Ribosome biogenesis [BR:
slaf03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
141589856
Chaperones and folding catalysts [BR:
slaf03110
]
Heat shock proteins
HSP70 / DNAK
141589856
Membrane trafficking [BR:
slaf04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
141589856
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
141589856
Proteasome [BR:
slaf03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
141589856
Mitochondrial biogenesis [BR:
slaf03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
141589856
Exosome [BR:
slaf04147
]
Exosomal proteins
Proteins found in most exosomes
141589856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
ParM_N
Motif
Other DBs
NCBI-GeneID:
141589856
NCBI-ProteinID:
XP_074266580
LinkDB
All DBs
Position
7:complement(21938029..21940108)
Genome browser
AA seq
625 aa
AA seq
DB search
MGQKNEEWPAIGIDLGTSYSCVGIWQHGQIEIIANDQNSRTTPSCVAFTNTHRLIGEAAE
NQSRTNHANTIFDAKRLIGRRFNDEMVQKDMKLWPFKVVSGLDFGKDDEKPLVVVTYKGE
EKEFTAEEISAMVLMKMKDTAETYLNMSVANAVVTVPAYFNDSQRQATKDAGVIAGLNVL
RIINEPTAAAIAYGFDKKISDHGSSKKSVLVFDLGGGTFDVSLVSIEKEVFEVKAVGGDA
HLGGVDFDNRMVNYFVEEFKRKHDKDLRDNPRALGRLRAACEKAKRTLSITTQTSIEIDC
LYGIIDFSSSISRARFDNLNVDLFQKCIAIVEGCLSDAHVKKTDVTDILLVGGSTRIPAV
QQLLQKFFDGKELCKGINPDEAVAYGAAVHAGILCGRNTDENLTLVDVVPLSLGVEMGSG
DMSVVIPRNTTVPTRQERIYGTLHTTEDCLASVLKIHVYEGEKNTAQDNNKLGVFELSGI
SPVGGASSLIQVVFEIDIHGILNVSAEDMSTGNRSEIKTINRSRLTKTEIDRMTNEAEGY
MAQDKKYSLMVKAKNTLEEYANKMWGRITNCRLKVSGNGKKAIMEAVKKILDWLSENPDQ
LLDITYYEGKLEELEQLCNSFISMM
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagaaaaacgaggaatggccagcgatagggattgatcttgggacgtcatactca
tgtgtcgggatatggcagcatggccaaattgagataatcgccaatgatcagaacagcaga
accacgccatcttgtgtcgcttttacaaacactcacaggcttattggtgaagcagctgag
aaccagagccgcactaaccatgccaacactatctttgatgcaaaacggctgatcggtagg
agatttaatgatgaaatggttcaaaaggacatgaagctttggccatttaaggttgtttct
ggtctcgactttggcaaagacgacgaaaagccgctggtagtggtaacctacaagggcgaa
gagaaagaatttactgctgaagagatatccgcgatggttctcatgaaaatgaaagacacc
gctgaaacctatctaaacatgtcagtggcgaatgctgttgtcacagttcctgcctacttc
aacgactctcagcgtcaagcgacaaaagatgctggtgtcattgccgggcttaatgtgttg
cgcattataaatgaaccaacagcagctgcaattgcttatggtttcgacaagaagatttca
gaccatggctcttctaaaaagagtgttttggtttttgatcttggtggtgggacttttgat
gtatctctggtttctattgagaaggaggtttttgaagtgaaggcggtaggtggggacgcg
caccttggtggggttgatttcgacaatagaatggttaattactttgtggaagagttcaag
agaaagcatgataaagatttgcgtgacaatccgagggctctaggtcggctaagagcagct
tgtgagaaagccaagaggaccctctcaataactacacagactagtattgaaattgattgc
ctttacggtatcattgactttagttcgagtatttctcgtgctcgttttgataacctcaat
gttgatctgtttcagaagtgtattgccattgttgaaggttgtttaagtgatgctcatgtt
aagaagactgatgttactgatattttacttgtgggtggatcgactcgaatacctgcggtc
cagcaactattgcagaagttctttgatggcaaggagctctgcaaaggcatcaatcccgat
gaggctgttgcatatggtgcagctgtccatgccgggatcttatgtggtagaaatactgac
gagaatctgactctagttgatgttgttccattatcccttggtgttgagatgggttctggt
gacatgtctgtcgtgataccgaggaatacaaccgtaccaacaagacaagagcgtatatat
ggaacattacacacgacagaggattgtttggcgtctgtgctgaaaatccatgtgtacgag
ggtgagaaaaatacagctcaagacaacaataaattgggagtctttgagctgagtgggatt
tcccctgttggtggagcttcaagcttgattcaggttgttttcgagatcgacatccatgga
atcctgaacgtatcagcagaagatatgagcacaggtaacagaagtgaaattaagaccatc
aatcgcagcaggcttaccaagacggagattgatagaatgacgaatgaggccgagggttac
atggctcaagacaaaaagtactctctaatggtgaaagccaagaacacattagaggaatat
gctaataaaatgtggggaagaattaccaattgtcgcctcaaagtcagtggcaatggtaag
aaggctataatggaggcagttaagaagatacttgactggctaagtgagaaccctgaccaa
cttctagatattacctattatgaagggaagctggaagagctcgaacaattgtgcaattct
tttatttcaatgatgtga
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