Silene latifolia (white campion): 141591014
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Entry
141591014 CDS
T11116
Name
(RefSeq) nuclear cap-binding protein subunit 2-like isoform X1
KO
K12883
nuclear cap-binding protein subunit 2
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03013
Nucleocytoplasmic transport
slaf03015
mRNA surveillance pathway
slaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141591014
09122 Translation
03013 Nucleocytoplasmic transport
141591014
03015 mRNA surveillance pathway
141591014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141591014
03041 Spliceosome [BR:
slaf03041
]
141591014
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
141591014
Spliceosome [BR:
slaf03041
]
Common components
Common spliceosomal components
Cap binding complex
141591014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
141591014
NCBI-ProteinID:
XP_074267591
LinkDB
All DBs
Position
1:48876..55923
Genome browser
AA seq
254 aa
AA seq
DB search
MALLFKDLNKLSAYRDRRFPGNQEDFEEALKNSITVYVGNMSFYTTEEQVYELFSRVGEI
KKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQRELEAQRTLVDYGAGSLGAFQPVMTAHHGRQE
RSHGHGGSYNRQGRDYHRKRHREDERHPTVMSKRIDREPRRNSDHESRPEKNPRFRESGD
SDEDDEDDDRKQRT
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggctttactattcaaggatctgaacaagttatctgcctaccgagataggcgatttcct
ggtaaccaagaagattttgaggaagcattgaagaattcaattactgtgtatgttgggaat
atgtcattttatacaacagaagagcaagtttatgagctgttttctcgagttggagagatt
aagaagataatcatgggtctggataagaactcaaaaactccttgtggattttgctttata
ttgtattactctagagaagacactgaggatgctgtcaaatatataagtggaacaattctt
gatgatcgtcctatccgtgtggattttgactgggggttccaagaagggagacaatggggg
cgtggtagaagtggtggtcaggtccgagatgaatatcgtaccgactatgatcctggtaga
ggtggttatggaaagttggtccaacgagaactagaggctcagaggacccttgttgactat
ggtgctggttctctgggagcttttcaacccgtcatgactgcacaccatggaagacaggaa
aggagccacggtcatggaggttcttacaaccgacagggtagagattaccatcgaaagcgg
catagggaggatgaacggcatcccactgtaatgtcgaagagaattgaccgtgaacctcgc
aggaattctgatcatgaatctagaccagagaaaaatcctcgtttccgtgaaagtggcgac
tctgatgaagatgacgaagatgatgacaggaagcagcgcacttaa
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