Silene latifolia (white campion): 141591122
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Entry
141591122 CDS
T11116
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
141591122
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
slaf04040
]
141591122
Ion channels [BR:
slaf04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
141591122
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF4826
Motif
Other DBs
NCBI-GeneID:
141591122
NCBI-ProteinID:
XP_074267642
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Position
7:complement(64242906..64249180)
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AA seq
704 aa
AA seq
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MHNINFYATSSKFPHFPSSLYVLRNKRRESKPRWWTQIHNPRSELIVKWNNLFFITCLIT
LFLDPLYFFVPYSCGEACVKSNIELSITITFFRTIADCLYLMHIFLKFRTAFISHNSKVF
GRKELVTDSRAIAIRYLKSTFAIDVAAMLPLPQIMIWFVVPALKTFSTAHTNHTVALMVL
VQFIPRLFVMIPLNRKIINSTGIAARNAWSGAVYNMLLFILAGHVIGGIWYLWALQRQHT
CWTIECLGERSKYPCNLSFFDERTKKNLAREKWLKGSSVRANCNPRHKGAQFDFGMFADA
FTDGVASAGFMQTYFYCLWWGLKSLSSYGQSIDASTNIEETLFSSFICVMGLFLFSHLIG
QVQNYLQSIMVRIEEWRIKRRDTEEWMQHRQLPEELRERIRRFEQYKWLATRGVDEESIL
QSLPLDTRREIQKHLCLGLVRRVPFFAQMDDQLLDAICERLISSLTTKDTYLVREGDPVM
EMLFIIRGQLESSTTYGGRSGFYNSIILRQGDFCGEELLTWAILPTSTLNLPSSTRTVKA
ITEVEAFALRADDLKFVATQFKRLQSKKLQHSFRYYSHQWRTWGACFIQAAWRRHKKKML
AEELARQEEYFYMMQDDEHGDEYYREDDSLLKHREDGVGSSSTSSSVDNSSALSQQPLGA
TFLASKFAANTKRGVFQKLKIDTSTDLKMPKMFKPEDPDFLSDI
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcataacattaatttttatgcaacatcttcaaaattccctcattttccatcatcatta
tatgttcttcgcaataaacgaagagagtctaaacctagatggtggacacaaattcataac
ccacgtagtgaattaatcgttaaatggaataatctttttttcattacatgtttaattacc
ctttttcttgaccctctttatttttttgttccttattcatgtggcgaagcttgtgttaaa
agtaacatagaattatcaattacaattaccttctttagaacaattgcagattgtctttat
ctcatgcatatatttttgaaatttagaactgcatttatttcacataattctaaagttttt
ggacgtaaagagcttgtaacagattctagggcaattgctatacgatatttaaagtctact
tttgctattgatgttgctgcaatgcttcctttacctcagataatgatatggtttgttgtg
ccagctctcaagaccttttcaacggcgcatacaaaccatacagtggcactaatggtgcta
gttcaatttatccctcggttgtttgtgatgataccattaaaccgtaagattattaattct
actggaattgcagcacgaaatgcttggtcgggtgcagtttataacatgctcttgtttata
ttagctggtcatgtaataggaggtatatggtatttgtgggcacttcaaagacaacataca
tgttggacaatagaatgtttaggagaaagatccaaatatccatgtaatctatcatttttt
gatgagagaactaaaaaaaacttagcacgtgaaaaatggttaaaaggatcaagtgtaaga
gccaattgcaatcctcgacacaaaggtgctcaatttgactttggaatgtttgctgatgct
ttcactgatggtgtcgcttctgctggcttcatgcaaacttatttctactgtctttggtgg
ggattgaagagtttgagctcttatggacaaagtatagatgctagtaccaacattgaagag
acattatttagtagctttatctgtgtgatgggtctattcttgttttcacatttgatcggt
caagtgcagaattatcttcaatccataatggtgagaattgaggaatggaggataaaaaga
agagatacagaggagtggatgcaacatcgacaacttccagaagaacttcgagagcgtata
cgacgatttgaacaatataagtggctagctacgagaggagttgatgaagaatctattcta
caatctctacctttagatactcgacgtgaaattcaaaagcatttatgtttaggccttgtt
cgtcgagttccattctttgcacaaatggatgatcaactactagatgcaatatgcgagaga
ctaatatcatcattaacaacaaaagacacatatttagtaagagaaggagatccagttatg
gaaatgttgttcataataagaggacaattagagagctcaacaacatacggaggacgatct
ggtttctataactccattattcttcgtcaaggcgacttttgtggcgaagaattattaaca
tgggctattttgcctacttccacattaaatctgccttcttctactcgaactgttaaagcg
ataactgaagttgaagcttttgcgcttcgagccgatgaccttaagtttgttgctactcaa
tttaagcgtcttcagagtaaaaagcttcaacattcttttagatactattcacatcaatgg
cgaacatggggtgcatgttttatacaagcggcatggaggcgtcataagaagaagatgtta
gccgaagaattagcaagacaagaagagtatttctatatgatgcaagatgatgagcatgga
gacgagtattatagagaagatgattcattattgaaacatagagaagatggagttggtagt
agtagcacttcatcctcagtcgataacagtagtgctcttagtcaacaaccacttggagct
acgtttttagcctctaaatttgctgcaaatactaagcgaggtgtctttcaaaagctcaag
attgatacatctactgatttaaagatgcctaagatgtttaaacccgaagatcctgacttc
ttgagtgacatttag
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