Silene latifolia (white campion): 141591392
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Entry
141591392 CDS
T11116
Name
(RefSeq) nuclear pore complex protein NUP58-like
KO
K14307
nucleoporin p58/p45
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141591392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141591392
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141591392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
TFIIA
DUF445
Motif
Other DBs
NCBI-GeneID:
141591392
NCBI-ProteinID:
XP_074267795
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All DBs
Position
7:2005296..2010621
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AA seq
485 aa
AA seq
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MSFSLFSTPQQQQQQSSLFNFNQPQQQQQQQQPNLFTQQPQQQQQQTAFQFQQPQQQFQQ
PQQQQQQQQLFLFTNDKTPASYGTKWADLHPDSQKVLLKIEERILEYRDESLRLDQCSRL
FDSSVSNNAFELDASRILQELGGISTSMERQKVVMQELMTVAKDMLRNAEIAVRSFMMLR
SRFLHQKTNPTSTLTSQGPTPPGGSGQPATTNTLQVVDFYSGIPKKPSPFMQQTVIRFEK
YLGECRQWIEELEQLLLADSDRNSISFNSSVVQSLPKVLTNVHEFFVHVAAKVESIHQYI
ASMRAAYLADQRYRGDVNDPFLEADRRETARQEAAAKRVHPTLHLPAPPPPQPTTQVAGL
FGSSATPGVSTAPQTSSSSGPSLFGTSLSTPAGSSSGQLFSTAFSTPAPSLFPSSGASSQ
SSLFPSSSPLLFASASTPSLFGAPSSAASGNSLFSTPFGTGAALASGSSLGNSTRNKGRA
RTSRR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtcattctctctcttctccacaccccaacaacaacaacaacagtccagcctcttcaac
tttaatcaaccccaacaacaacaacaacaacaacaaccgaaccttttcacccaacaaccc
caacaacaacaacaacaaacggcgtttcaatttcagcaaccacagcaacaattccagcaa
ccacaacagcaacagcagcaacaacagttgtttctttttacaaacgacaagacgcctgcc
agttacggcactaagtgggcggatcttcaccccgactctcagaaagttctccttaaaatc
gaggaaagaatactggagtatagagatgaaagcctgagattagatcaatgtagtcgtctt
ttcgattcttccgtttccaacaatgcttttgaactcgatgctagtcgcattcttcaggaa
cttggtggaattagtacttcaatggaaagacaaaaagttgtaatgcaagagctaatgact
gttgccaaggacatgctgagaaatgctgagattgcagttcgttcttttatgatgcttcga
tccagattccttcatcagaaaaccaaccccacctcaactctcacctctcaagggccaacg
cctcctggtggttctggtcaaccagctacaaccaatacgttgcaagttgttgacttctat
agcgggattccaaagaaaccatccccgttcatgcagcaaacagttatccgatttgagaaa
tacctcggggaatgccgccagtggattgaagagttagagcagcttcttcttgcagactct
gatcgaaactccatcagttttaactcgtcagttgtgcagtctcttcctaaagtactgacc
aacgttcatgaattttttgtgcatgtagctgctaaggtggagagcattcatcagtacatt
gcatccatgagagcagcatatcttgccgaccagcgataccgtggagatgtgaatgatcct
tttttggaggccgatagacgtgaaacggccagacaagaagcagctgcaaagagagtacac
ccgacattgcatttgcctgcaccaccaccaccacagcctacaactcaggttgctgggttg
tttggcagctcagcgactcctggggtatcaactgcgccacagacttcgtcatcatctggt
ccttctctttttggcacatcattgtctactcctgctggtagttcttctggacaactgttt
tctaccgctttttctactcctgcaccttctctttttccatcatccggtgcttcttcccag
tcatctctctttccttcctcgtcaccattgctgtttgcctcagcctcaactccctcgctg
tttggcgccccgtcatctgctgctagtggaaactcccttttttcaacgccttttggaaca
ggtgctgcattagcatcagggtcaagcctgggaaactcaactagaaataagggaagagca
cgcacctcaaggcggtag
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