Silene latifolia (white campion): 141591669
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Entry
141591669 CDS
T11116
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141591669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slaf03041
]
141591669
Spliceosome [BR:
slaf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
141591669
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
FtsL_2
Motif
Other DBs
NCBI-GeneID:
141591669
NCBI-ProteinID:
XP_074268173
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All DBs
Position
7:10088549..10094251
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AA seq
488 aa
AA seq
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MATLADSFLADLDDLSDNEAEDMDHVDLDAEKMEEDIDGELADIESLNYDDLDNVSKLQK
SQRYNDIMKKVEEALLKGSEVPEHGIVLEDDPEYQLIVDCNALSVDIENEIIIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKISNETDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEDVLQKTIEACDRALDLDSARKKVLDFVESRMVYIAPNLSAIVGSAVAAKLMGTAGGL
GSLAKMPACNVQLLGAKRKNLAGFSSATSQYHIGYLEQTEIFQSTPPALKMRACRLLAAK
STLVARVDSTRGDPTGKMGRTFREEIRKKIEKWQEPPPPKIPKPLPVPDSEPKKKRGGRR
LRKMKERYAVTDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRMSAGPSKLIV
KAAKKSKEKRYGSSGTTSGLTSSLAFTPVQGIELSNPQALAHQLGSGTQSTYFSETGIFS
KVKSNLGR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacttgctgattcattcttggccgatcttgatgatttatcagacaatgaagcc
gaagacatggatcatgtggatcttgatgcggaaaaaatggaggaggatatagatggggag
ttggctgacatagaatctctgaactatgacgatcttgataacgtttcaaaactgcaaaag
tctcaacgttacaatgatataatgaagaaagttgaagaagccctgctaaaaggttcggaa
gttcctgaacatggaatagttttggaagatgatcctgaatatcagctcatcgttgactgc
aatgcgttatcagtggatattgaaaatgagataatcatcattcacaacttcatccgtgac
aaatatcgcttgaaatttccagagcttgagtccctagttcaccaccctatcgattacgct
cgtgttgtgaagaaaattagtaatgaaacagacttgaccctagttgatctagaagggctt
ctgccatcagctatcattatggttgtttctgtaactgcttcaaccaccagtggcaagccg
ctaccagaggatgttttacagaaaactattgaggcatgtgatcgtgcacttgatctcgat
tctgcaaggaaaaaagtccttgattttgtggagagcagaatggtttacatagcaccaaat
ctttcagctattgttggaagtgcggttgcagcaaagcttatggggactgccggaggtttg
ggatcactcgcaaagatgccagcctgcaacgtgcaacttcttggggccaaaaggaagaat
ctcgcaggattttcctcggcaacttcccaatatcatattggttatcttgagcagacagag
atattccagagtactccccctgctcttaaaatgcgtgcttgtcgtcttttggcggctaag
tctacccttgtagctcgagtagattctacaagaggagacccaactggaaagatgggaagg
acattccgggaagagattcgcaagaagattgagaagtggcaagagccaccacctcctaag
atccctaaacctctaccagtgcctgattctgagccaaaaaagaaaagaggcggacgaaga
ttgaggaagatgaaggagagatatgctgttacggacatgagaaagctggcaaataggatg
cagtttggtgtccctgaagaaagttcactaggtgatgggttgggagaaggatatggcatg
cttggtcaggctggaagtggtaaactacgtatgtcagctggtcccagtaagcttattgta
aaagctgccaagaaatcgaaggagaaacggtatggaagtagtggcactacctcagggcta
acttcgagtttggcatttactcctgttcaggggattgaactttcaaatccacaagctctt
gcgcatcaacttggaagtggaactcagagtacatatttctctgaaacaggcatattttca
aaagtcaagagcaacttaggtagataa
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