Silene latifolia (white campion): 141591718
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Entry
141591718 CDS
T11116
Name
(RefSeq) nuclear pore complex protein NUP107
KO
K14301
nuclear pore complex protein Nup107
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141591718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141591718
03036 Chromosome and associated proteins [BR:
slaf03036
]
141591718
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141591718
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
141591718
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
141591718
NCBI-ProteinID:
XP_074268244
LinkDB
All DBs
Position
7:complement(10916242..10933250)
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AA seq
1078 aa
AA seq
DB search
MDVDMDTSPSYFDPQDISIREQYRRYGKRQSSPSTSPLHNSSGRRSNTALFLEDIKQEVE
SQSYREGTPSRTHSAYKQRSHDGQVVPYFDSVVNSSRWTGNYSLKACKIEDDDLDSDETT
FTLFGSLLDSACQGLISIPELILQFEKSCRDVSESIRYGPSERHRIIEDRLIRQKAQLLL
DEAASWSLLWYIYGKGNEEIPGDLVLRPTTTHLEACKFVAKELTAQLCLRITQWLEGLAS
KALDLESKIRGSHVGTYLPSSGIWHNTQRHLKKIDSNLKTVKHLDFDAATRENALPLPDD
RKQDESLLEDIWTLLRAGRLEEACELCRSAGQPWRAASLCPFGGLDLVPSVEALAKNDKA
RTLQAIEVESGLGRQLRLWKWASYSASERIGEQGGGKYEAAVFAAQCSNLKRMLPVCTDW
ESACWAMAKSWLDVQMDMDLAQLQPGRMELLKNYEDATEGSPGQGSSSAILGKPENWPLQ
VQNQQPRHLSSLFQKLHSSDLVNEAVIRECKEQHRQIEMNLMSGDIPHLLELVWSWISPS
DDDQNAFRPHGEPHMLRFGAHLVLVLRLLLGDELEEGAAKEKIMNVGDLILHIYAMYLFS
QQHEELVGIYASHLARHRCIDLFVNMMELRLNASVHVKYKLFLSAVEYLPFSPDDNSSGS
FEEIIERVLSRSREIKPGKYNNSEDVAEQHRLQSLDKAMVVQWLCFTPPSTIDDVEAVSS
KLLLQSLMHSNILFREFALISMWRVPAMPLGAHELLGFLAEPLKQPTENLMGLEGHDVPD
LIKEFKDWSEYYSCDARYRNWLKIQLENAEVSPSELSTEEKNRAIFAAKETLDSSLLLLQ
RKESPWLVPTEDKVYSTPEEPLYLELYATAILCLPSGECMSPDATLCATLMSALYSSVSE
EVAVGRELTVDVKMSTKDNFSVEVILRCRAVEGDGLGHHEHSDGGLLASVIASGFKGELP
RFQAGVTMEISRLDACYFVHGDTSKDPATYIVRGLCRRCCLPELVLRCMQASVSLVELNE
VPERHDELIELVACPETGFLHLFSQQQLQEFLLFEREYSICLMELQEEHSAGAHELLN
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcgacatggatacttctccaagctatttcgatccccaggacatcagcattcgg
gaacaatatcgccgctacggaaaaaggcagtctagccccagcacttcaccactccataac
agttctggaagaaggtctaacactgctttgttcctcgaagacataaaacaagaggttgaa
agccagagttatcgagaaggaaccccttcccggacacattctgcatacaaacaacgatct
catgatggtcaagttgttccatattttgatagtgtagttaactcatctcgttggactgga
aattactctttgaaagcatgtaaaattgaggacgatgatctagattctgacgaaacaaca
tttactttatttggatctcttctagattctgcctgccaagggcttatatcaattcctgag
cttatccttcagtttgaaaaatcatgccgtgatgtttctgaatcaataaggtatggcccc
agtgagagacatcggattatagaagacagattgatacggcaaaaagctcagttgctgctt
gatgaagctgcatcatggtcacttctttggtatatatatggaaaaggaaatgaagaaatt
cctggagatcttgttttgaggccaacaactactcatctggaggcttgtaagtttgttgcc
aaggaactcactgctcagctgtgccttcggataactcagtggttagaggggctggcgtcc
aaagccttggatttagagagcaagattcgcggttctcacgttggtacataccttcctagt
tctggcatttggcataatactcaacgacatcttaagaagatagatagcaatctaaaaact
gttaagcatttggattttgatgctgcaactcgagaaaacgcattgcctcttcctgatgac
agaaaacaagatgagtctttactggaagatatttggactttattacgtgcgggaagactg
gaggaagcatgtgaactctgcagatctgctgggcagccatggagggcagcaagtctatgc
ccatttggaggattagacctagtaccatctgttgaagcactggcaaaaaatgataaagcc
agaaccctacaagccattgaagtagaaagtggacttggccgccaattgcggctatggaaa
tgggcatcttattctgcctctgagaggattggtgagcagggtggtggaaagtacgaagca
gctgtgtttgcagcccaatgtagtaacttaaagcgcatgcttccagtatgtacagattgg
gagtcagcatgttgggcaatggccaagtcatggcttgatgttcaaatggatatggattta
gcccaattgcaacctggaagaatggaacttttgaaaaattatgaagatgctactgaaggg
agtcctggacagggtagcagttctgcaattttaggaaagccagaaaattggcctcttcaa
gtccaaaaccagcaaccacgccatctatcttctctttttcaaaaacttcattccagtgat
ctggtgaatgaagctgttatccgtgaatgcaaggagcagcaccggcaaattgagatgaac
cttatgtcgggagatataccccatctattggaacttgtatggtcatggatttcaccttcg
gatgatgatcaaaatgccttcaggccacatggagaaccccatatgttacgttttggagcg
catctagtgttggtgcttaggcttctgcttggagatgaattggaggagggtgctgcaaag
gagaagataatgaatgttggggatctcattcttcacatctatgcaatgtacctattttca
caacaacacgaagagctggtcggcatatatgcttcccatctagcacgtcaccgttgcatt
gatctctttgtaaacatgatggagctgcggctgaatgctagtgtccatgttaaatacaaa
ttatttctatctgctgtggagtatttgccgttttctcctgatgataactctagtggcagc
tttgaggaaattattgagagagtattgtctcgatctcgggaaataaaaccaggtaagtat
aataactcggaagatgttgccgaacagcatcggttgcaatcactggataaagctatggtc
gtgcagtggctttgctttacgccaccatccaccattgatgatgttgaagctgttagttcc
aagctcctccttcaatctctgatgcatagcaacatactcttcagggaatttgctttaatc
tccatgtggagagtgccagctatgcctttaggtgcgcatgaattgcttgggtttcttgct
gaacccctgaagcaacccactgaaaatcttatgggtttggagggccatgatgttcccgac
ttgattaaagaattcaaagattggagtgagtactattcatgtgatgcaaggtatcgaaac
tggcttaaaattcaactggagaatgcagaggtgtctcccagtgaattgtctacagaagaa
aagaacagagccatttttgctgcaaaagaaactctggattcatcattgttacttcttcag
agaaaagaaagcccttggttggttcctactgaagataaagtttatagtaccccagaagaa
cctttgtaccttgaattatacgccacagcaattttgtgtttgccttctggtgaatgcatg
agtccagatgccacattatgtgcaacattgatgagtgccctatactcttctgtatccgaa
gaagttgccgttggtcgagaattgacggttgatgtgaagatgtccaccaaagataatttc
tctgtcgaagttatacttcgctgtcgggcggttgaaggtgatggactaggacatcacgag
cacagtgatggtggtctccttgccagcgtgattgcttccggctttaaaggtgaacttcca
cgattccaagctggggtcactatggagatttcacgacttgatgcttgttatttcgttcac
ggagacacaagtaaagaccccgctacatacattgtgcgtggtctttgccgtagatgttgt
cttccagaactagttctacgttgcatgcaggcatcggtgtcactggtggagctgaatgag
gttccagagaggcatgatgagttgattgagcttgttgcttgtccagaaactgggttcctc
catttatttagtcagcagcaattgcaggagttcttgctgtttgagagggaatattcaatc
tgcttgatggagcttcaagaggaacattctgcaggcgcacatgaattgttgaattag
DBGET
integrated database retrieval system
