Silene latifolia (white campion): 141591802
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Entry
141591802 CDS
T11116
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141591802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slaf03041
]
141591802
Spliceosome [BR:
slaf03041
]
Common components
Common spliceosomal components
SR proteins
141591802
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
141591802
NCBI-ProteinID:
XP_074268377
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All DBs
Position
7:complement(13906155..13912954)
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AA seq
316 aa
AA seq
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MSSRSKRTLYVGNLPGDIREREVEDLFYKYGPIAHIELKIPPRPPGYAFVEFEEARDALD
AIDGRDGYDFDGHRLRVELAHGGRGHSASTDRHSSFSGGRRGVSKHTEYRVLITGLPNSA
SWQDLKDHMRKAGDVCFSQVFREGGGTTGIVDYTNYEDMKNAIRKLDDTEFRNAFSRAYV
RVKEYKGSPSPSRGRSRSRSRSRGRGRSYSRSRSPSRSPKKASRRLPARSRSRSVSSRSR
SRSPVSRSPSKSRSPVPSRKKNVSKSPKKRSPSPRRSRSRSLSKSKSPVRERSRSLSKSK
SPSPVRARSRSRSLSQ
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagatctaagagaacactttatgttggcaatcttcctggtgatattagggag
agagaagtcgaagatctattttacaagtatggacccattgctcacattgagttgaagatt
ccaccaaggcctccaggttatgcatttgttgagtttgaggaggctcgtgatgccctagat
gctattgatggccgtgatggctatgactttgatgggcaccgtcttcgggttgagttggct
catggtggacgtggtcactcagcatcaactgaccgccatagcagtttcagcggtgggcgc
cgtggtgtctcaaaacacaccgaatatcgagtgctgattacgggattaccaaactctgct
tcttggcaagacttgaaggatcacatgcgtaaagctggagatgtttgcttctctcaagtt
tttcgcgagggtggcggaacaactggaattgtggattatacaaattatgaagacatgaaa
aatgctattagaaagcttgatgacacagagttccgcaatgcattttctcgagcatatgtc
agggtgaaggaatataaaggtagccctagtccttcaagaggaaggagcagaagccgcagc
cgcagccgtggccgtggtcgtagttatagcaggagcagaagtccaagcaggtcaccaaag
aaggcttctcgcaggttgcctgctaggtctcgatctcgttcagtctcttcacgttctcgc
tcgaggtctcctgtttcaagatcaccttccaaatccagatcaccggtgccatctcgtaag
aaaaatgtgagtaaaagcccgaagaagcgtagccccagcccacgccgtagtaggagcagg
agcctaagcaagagcaagagcccagttagggaacgaagcaggagcctgagcaagagcaag
agcccgagcccggttagggcacgaagcaggagcaggagtctttcacagtga
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