Silene latifolia (white campion): 141591845
Help
Entry
141591845 CDS
T11116
Name
(RefSeq) pre-mRNA-processing factor 39-1-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slaf03041
]
141591845
Spliceosome [BR:
slaf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
141591845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_12
TPR_16
NRDE-2
TPR_19
TPR_7
TPR_MalT
TPR_10
Ig_NUP210_8th
Motif
Other DBs
NCBI-GeneID:
141591845
NCBI-ProteinID:
XP_074268430
LinkDB
All DBs
Position
7:15863385..15874321
Genome browser
AA seq
825 aa
AA seq
DB search
MGESETVVAQTSTVVGYTSDNHTEDHMNVNTSTSETAAVTTTSSVIALGSPDAVHAATDP
NVVNSIVYPSSTAQDASLPSAEETGPIEVVNQSTAEGQSMSMGLNQMDVYNASANGTVTT
DANGNLTSPHEVEVATATQHDDGADNALSAEEQRLWNTVKANSSDFNAWTQLIEETERMA
QDVILKIRKVYDAFLAEFPLCYGYWKKYADHEARFGAIDKVVEVYERAVLGVTYSVDIWL
HYCSFAISTYGDPDTIRRLFERSLDYVGTDYLSYTLWDKYIEYEYSQQDWGRLAMIYTRI
LENPIQQLDRYFTSFKQLAVTQPLAQLRTTDETAAVTAGAASFDSNADGQASEEVHSDAP
EESSKPIHDGPMEAEELDKYIAVREELFKKAMEFDSKISGFETAIRRPYFHVRPLNDAEL
ENWHNYLDFIERNEDFNKIVKLYERCLIACANYPEFWTRYVLCMEGSGSVDLADNALARA
TQVFVKRQPEMHLFAALIKEQRGDIPGARAAFQLVHTEISPGLLEAIIDHANMERRLGNM
EEAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYLAHGNAEKARDILTQAVDHIQLSKP
LLEALIHLESIQSLPKRIDYVESLVEKYLSVADNSDATNVQEKEDLSSIYLEFLDLFGDI
KSIKKAKDRHVRLFSRHRSSSESRKRQADDFLSSDKAKLGKSYTEVPSTATPGGAYPATQ
NQWPSGYAAQPQSWPQGAQAQGQPYNPAYPQQPTYAGYYGNNYAPQQLAAAPVPQTAAYG
AYPSTYPAQAYPQQTYVAPATAPAPAAPAAQQPAAPPQGYYGNYY
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagagtgaaacagttgttgctcaaacatctacggttgtgggttatacttccgat
aatcataccgaagatcacatgaacgttaacacgagcacttcggaaactgccgctgtcacc
actacaagtagtgtcattgctttgggttcacctgatgcagtacatgcggcaacggatccc
aatgttgtaaactcaattgtttatccaagttctactgcacaagacgcttctcttccttcc
gctgaagagactgggccaatagaagttgtgaaccagtctactgcagaaggtcagagcatg
tcaatgggtttaaatcagatggatgtttataatgctagtgcaaatgggacggttactact
gatgcaaatgggaatcttacttctccccatgaggttgaagtagcaacagctacgcaacac
gatgatggtgcagataatgctttatctgctgaagaacaacgtctgtggaacacagtaaaa
gcaaattcatcagattttaatgcatggactcagctaattgaagagacagaaaggatggcg
caggacgttatattgaagatcagaaaggtttatgatgcctttttagctgaatttcccttg
tgttatggttattggaagaagtatgctgatcatgaagcacgttttggagctattgataaa
gttgtggaggtgtatgaacgagcagttctgggagtcacatattcagtggacatctggttg
cactattgctcgtttgctattagcacatacggggatcctgatactataagaaggttattt
gagcggtcattggattacgttggaacagattacctatcgtacactctttgggacaagtac
attgagtatgagtattcacaacaggattggggacgtctcgctatgatatatactaggatc
ttggagaacccaattcagcagctggaccgatattttactagcttcaagcaattagctgta
acccaacctttggcacaactgaggacgactgatgaaacagcagcagtgacagcaggtgca
gcttctttcgattctaatgcagacggtcaagcatccgaagaggttcattccgatgcaccg
gaagaatcttctaaacccatacatgatggcccaatggaagcagaggaattggataagtat
atcgcagttagggaagagttgtttaagaaagctatggagtttgattctaagataagtggt
tttgaaacagctattagaaggccatactttcacgtccgacctttgaatgatgctgagcta
gaaaactggcataactatctggatttcatcgagagaaatgaagacttcaacaagattgtc
aagctgtatgaaagatgtcttatagcatgtgcaaactatcccgagttttggacaagatac
gttctatgcatggaaggaagtggcagtgttgatcttgcagacaatgctcttgctcgtgct
acacaagtattcgttaagaggcaacctgagatgcatctttttgctgctctgataaaagag
cagcgtggtgacatacctggtgctcgagctgcctttcaactggtgcatactgagatttct
cctgggcttttggaggccatcattgatcatgcaaatatggaaaggcggctgggaaatatg
gaggaagcattttctttatatgagcaagcaattgccattgagaaagggaaagaacattca
caaactttaccaatgctatttgctcagtactctcgatttgtatatttggcacatggaaat
gctgagaaagctcgggatattcttactcaggcagttgatcatatccaactttcaaagcca
cttctggaggctttgatccatctagaatctatccagtcacttccaaagcgaattgattat
gtggagtctttggttgaaaagtatctttcggtagctgacaactctgatgctacaaatgtg
caagaaaaagaggatttgtcaagcatttatttggagtttctcgatctttttggtgacata
aaatccataaagaaagccaaggatcgacatgttaggctgttttcacgccacaggagctca
tcggagtcaaggaagcgtcaagctgatgacttcttatcttcagacaaagcaaagcttgga
aaatcctacacagaagttccatcaactgccacacctggaggagcgtatccagcaactcaa
aatcaatggccatctggctatgctgcgcagcctcaatcttggccacaaggtgctcaggcc
caaggacaaccatataatccggcctatccacaacagcctacatatgcgggatactatgga
aacaactatgctcctcaacaattggctgctgcaccagtacctcaaactgctgcttatggt
gcctacccttcgacgtatccagcacaggcgtacccccaacaaacatacgttgccccagct
acagcacctgcacctgcagctccagcagcacagcaacctgctgctccccctcaaggttat
tatggtaattattattaa
DBGET
integrated database retrieval system
