Silene latifolia (white campion): 141591915
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Entry
141591915 CDS
T11116
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
slaf01002
]
141591915
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141591915
Enzymes [BR:
slaf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
141591915
Peptidases and inhibitors [BR:
slaf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
141591915
Ubiquitin system [BR:
slaf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
141591915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
141591915
NCBI-ProteinID:
XP_074268509
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All DBs
Position
7:complement(22820987..22833186)
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AA seq
850 aa
AA seq
DB search
MSAAAAAAAAAAAASKNSAEKQPPTLRKVEFHLARQPGSFFSNSNPNPMLQMLNPNSSNN
FTMFPFSNPPSSSFNSRKSEPSDFFEDAVLSFRMPFRRIGPGLVNLGNTCFLNSVIQCLT
YTEPLVGYLQSGKHQTSCRVAGFCAFCAIQNHVNRALQSSGRILAPKDLVSNLRCVSRNF
RNSRQEDAHEYMIHLLESMHKCCLPSGVPAESPGAYEKSVVHRIFGGRLRSQVKCLQCSY
CSNTFDPFLDLSLEIVKADSLCNALKHFTSPEQLDGGEKQYKCERCKQKVRALKQLTVSK
APYVLTVHLKRFRSHFSGQKIDKKVQFDSTLNLKPFVTGDYEDDLIYTLYGVLVHAGWSA
HSGHYYCFVRTSNGLWYSLDDNMVTQVSERVVMEQKAYMLFYVRDRKKFVSKKVMDIVQK
ENLVAAMRNVSSSLPGVKHPAAGRNSDEAIQSGTAVKRSANSNPSEVAVQANSSRSSKQD
INRSLGNISSESSVMKTDNLSEPKANLDNVMKLSKGAENSGENVASSDSNKTLKSDACLH
VEKTASLECPSSVGDKSSGVGEKSSVLIQDKALTDVLLDSTIQGNSQGGPTEISKVTKSR
IKKKCLEKPTRQGLLKKISKSRIVGMHLSTKLLYAAALNCRKKGKCKRIKQQTKLALHKN
LFNEGVVPANTNSSAAIASTSLGVDNSISREREKDDSKDCEMDTNSSLPLVESNDVLKSI
AQSSQALHVIGKLPEEAISMKAQCKDVGGSCSGKQHFQPQNKLSQNTIVTSWETVEPASK
NVADNGPEIVTIGHVLDEWDEEYDRGKRKKVRGLKNSLGGPNLFQEISSKKAKLEAKNGK
HIYVHEPFRI
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgccgccgctgccgctgccgctgctgccgccgcatcaaaaaattccgccgaa
aaacagccgccaacgttgcgtaaagtagagtttcatctagcgagacagcctggatctttt
ttctcaaatagtaaccctaatcccatgctccaaatgttaaaccctaattcttccaataat
tttacaatgttccctttctcgaatccaccttcttcttcgttcaattcgagaaagtcggaa
ccttctgatttttttgaggatgccgttctctcttttcgaatgccgtttcgccgtattggt
cctggattggtgaaccttgggaatacctgttttcttaactcagtcatacaatgtcttaca
tacacggagccgttggtcgggtatttgcagagtggcaaacaccagacttcttgccgtgtt
gctggtttctgtgctttctgtgccatccagaatcatgttaaccgtgccttgcaatcgtct
ggaagaatattagcgccaaaagatcttgtttcaaacttgagatgtgtatctcggaacttt
cgaaactcgagacaagaagatgcacatgagtacatgatacatctgctggagtccatgcat
aaatgttgtttaccttcaggagtccctgctgagtcacctggtgcttatgaaaaaagtgtg
gtccaccgtatatttgggggtcgcttacggagtcaggtgaaatgtttgcagtgttcttat
tgttctaatacattcgatccgtttttagatctgagtcttgaaatagtcaaggcagattct
ctttgcaacgcccttaagcatttcacttccccagagcaactagacggtggtgagaagcaa
tacaaatgtgaaaggtgcaagcagaaagttagggcgctcaaacagcttacggtgtccaaa
gcaccttatgtcctaactgtacacctgaagcgttttcgatcgcatttttctgggcaaaag
attgacaagaaagttcagtttgactctacattgaatttgaagccttttgttactggagac
tacgaggatgatttgatatatacactctatggagttttggttcacgctggctggagcgca
cattctggtcactactattgctttgtccgcacctcaaatggtctgtggtactcacttgat
gacaatatggttactcaggtgagtgagagggttgtcatggagcagaaagcatatatgttg
ttttatgttcgtgatcggaagaaatttgtttctaagaaagtgatggacattgtacaaaaa
gaaaacctggttgcggctatgcgaaatgtttcaagttcccttcctggtgtcaagcatcct
gctgctgggagaaattcagatgaggctatacagtctggtacggctgtgaaacggtcggcg
aactctaacccttctgaagttgcggttcaagcaaattcatcaagaagctcaaagcaagac
ataaatcgaagtttaggcaatatttcatctgaatcttcagttatgaaaactgataatttg
tcggaaccaaaggctaatttagataatgtgatgaaattaagcaagggtgctgaaaatagt
ggtgagaatgtagctagctcagatagcaacaaaacgcttaagagtgatgcttgcttacac
gttgaaaaaactgcaagtcttgaatgtccatcaagtgttggtgataaatcttctggtgta
ggggagaaatcttctgttctgatacaagataaggcgttgacagatgttctattggattca
acaattcagggaaacagtcaaggtggaccgactgaaatttcaaaggtgaccaaatcaaga
ataaaaaagaagtgtttggagaagccaacacggcaaggactgttgaagaagatatcaaag
tctaggattgtagggatgcatttgagcaccaagttgttgtatgcggctgctttgaattgt
aggaagaagggaaaatgcaagaggattaaacaacaaacaaaacttgctttgcacaaaaac
ttgtttaacgagggagttgttcctgcaaacacaaattcttctgctgcaattgcatcaacc
tctttaggagttgacaactctatttctagagagcgagaaaaggatgattccaaggactgt
gaaatggataccaattccagtttacctcttgtggaatcaaatgatgtactcaaaagtata
gctcaatccagccaagcactgcatgtaattggtaagcttccagaagaagctattagcatg
aaagcgcaatgcaaggatgttggtggttcttgttctggaaagcaacattttcaacctcag
aataaactatcgcagaatactattgtgacaagttgggaaacagtagagcctgcctcaaaa
aatgtggcagacaatggcccggagatagttaccattggtcatgtattggatgaatgggat
gaggaatatgaccgaggtaaaaggaaaaaggtgagggggttgaagaactctcttggcgga
cctaatttattccaagaaatatcttcaaagaaagcaaaattagaggcaaagaatgggaaa
catatttatgtacatgagccattcaggatatga
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