KEGG   Silene latifolia (white campion): 141591944
Entry
141591944         CDS       T11116                                 
Name
(RefSeq) sm-like protein LSM4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf03018  RNA degradation
slaf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141591944
  09123 Folding, sorting and degradation
   03018 RNA degradation
    141591944
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slaf03019]
    141591944
   03041 Spliceosome [BR:slaf03041]
    141591944
Messenger RNA biogenesis [BR:slaf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     141591944
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     141591944
Spliceosome [BR:slaf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    141591944
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 141591944
NCBI-ProteinID: XP_074268562
LinkDB
Position
7:23342925..23347439
AA seq 144 aa
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEEKIRSDRRPPGVGRGRGRGREEGPGRQQKGIGRGMDDGG
KGAGGRGRGASIGKPSGKAGGRGR
NT seq 435 nt   +upstreamnt  +downstreamnt
atgcttcctctatcgctgttgaagaccgctcaaggtcaccctatgttggtagaattgaag
aatggagagacatataatgggcatttggtaaattgtgatacttggatgaatattcatctt
cgtgaagttatctgtacttctaaggacggagaccggttttggagaatgcctgaatgttat
atcagggggaacactatcaagtatcttcgagttcccgatgaggtcattgataaagtgcaa
gaggagaagatccgttcagacaggaggccacctggggtaggacgtggaagaggaagaggt
agggaagaaggtcctggaaggcagcagaaaggcattggacgtggtatggatgatggtggt
aaaggtgctggaggccgaggccgtggtgcttctattgggaagcctagtggaaaagctggt
ggacgagggcgttga

DBGET integrated database retrieval system