Silene latifolia (white campion): 141591985
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Entry
141591985 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141591985
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141591985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141591985
03036 Chromosome and associated proteins [BR:
slaf03036
]
141591985
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141591985
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
141591985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
141591985
NCBI-ProteinID:
XP_074268615
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Position
7:24834545..24839754
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AA seq
938 aa
AA seq
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MWNSGDKTNSTHNPFAVNTTGNASMSGFGNPNNSAPNPFAVNTTGNASMSGLGNPNNSAP
NPFALNTTSNASTTVFGNMTNSTHNPFAVNTSSNASMSVSGIPNNSSSNPFANNTNGNAS
LSTFGNMTNATHNPFAVNTTGNASVSVFGNPSNPAPNPFGVNANGNTSMSTLGNPSNPTP
NPFALNTNGNSTFRNPSNPPPNPFAVKPPENSPMPIYGNTNNSTCNPFAGNTFSNTTSPS
FPFRGITFDGTSTGQFGAQPSVLTSPLTFGVPAAPAETSGTPAAFTNHMRNNAFGWGPGG
SAPSSFSQSSGLKFGPSSNSLFGTKGLMTSTSAGTNISVSNAGSFSLGSTKPCSNPQFSF
GLNKGSKIKPYAATKNPEDSKEQFLSISSMPVYQSKCHEELRWEDYELKSGGTPTTVSTG
SFPCPVSQFPISNITPTALNPFSPSPIPSLNFTPSNPTTAASLSNSAPSSTTTPVFTLPL
SPFQTPSFPKQDPSSNSTPSTNITSVFNQPPSSVLNTSFTSLTPLSNSNPWPFTQLSTLN
SIPANPLNLIPPSTSTSSFTKPTDSGNSVPNTSFPTPNPSFNFTAPSLIQPSTSNPWALT
QPSTLTETGKSQINPAPSTDKAVDCIIAVKDPFGPQSASSHSLIDHRICSPLIQNGISGM
PVIDKPATTRISSLVTSRHIPQRPLTVRARKYNPKRDGPKVPFFDHIDETPGTQKESTFI
IPRENPRSVFEATPKQSGVSCAKADVTDASTSLHDLRLKSKTDEASSSTPCKLECQKLVN
QKLQQANPSASVPKLQRTDYYTQPSIQELLSAESNDPGFCSHVQDFVVGRHGYGEVKFKG
ETDVRGLDLDALVSFNKREVIVYEDEHEKPEIGEGLNKQAEVTLLNVKCSDKTGKEYKSG
KMVDKFLEKLKKVAEDQGAEFVSYDAVNGVWKFQVQHF
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgtggaattccggggataagaccaactcgactcataatccatttgctgttaatactact
ggcaatgcatcaatgtcgggctttgggaatccaaataactcggctcccaatccttttgct
gttaatacgactggcaatgcatcaatgtcgggccttgggaatccaaataactcggctccc
aatccttttgctttaaatacgactagcaatgcatcaacgacagtttttggaaatatgacc
aattcgactcataatccatttgctgttaatacgtctagcaatgcatcaatgtcggtttct
gggattccaaacaactcgagttctaatccttttgccaataatacaaatggcaatgcatca
ttgtcaacctttggaaatatgactaatgcgactcataatccatttgctgttaatacgact
ggcaatgcttcagtgtcagtctttgggaatccaagcaacccagctcctaatccttttggt
gttaatgcaaatggcaacacatcaatgtcgacccttggaaacccaagcaaccctactccc
aatcctttcgcattaaacacaaatggcaattcgacctttaggaatccaagcaacccacct
cctaatccttttgctgttaaaccacctgagaattcgcctatgccaatctatgggaataca
aacaactcaacttgtaatccttttgccggtaacacatttagcaacacaacttccccaagt
tttccatttcggggaatcacttttgatggaacttcaactggacaatttggagcacagcca
tcagttctaacatctcctttgaccttcggagttccagctgcccccgcagaaacttctggt
acacctgcagcattcaccaaccatatgcgtaacaatgcctttggttgggggcctggtgga
agtgcaccttcgtctttttcacagtcgtcaggattaaagtttgggccgtcttcaaattct
ctctttggtactaaagggcttatgacatcaacatctgctggtacaaacatatctgtttca
aatgctggatcatttagtcttggttctacgaaaccttgcagtaatccgcaattttcattt
ggtctgaataaaggaagtaagatcaaaccgtatgcagccaccaagaatccagaggatagc
aaagaacaattcctttcaatctctagtatgcccgtttatcaaagtaaatgtcatgaagaa
ttgagatgggaggattatgagcttaaatcaggaggcactcctactactgtttcgacaggg
tcatttccctgtccggtttctcagtttccgatatcaaacataactcctactgctttgaac
cctttctccccaagtccaattccgtcattgaatttcactccatctaatcctactactgca
gcttcactgtcaaattctgccccatctagcaccacaacaccagtattcactctcccttta
tcgccttttcaaaccccttcctttcccaaacaagatccatcatcaaactcaactccatct
accaacataacatcggtgttcaatcaacccccatcttctgttctgaatacttcctttact
agtctaaccccattatcaaattcaaatccatggccgttcactcagctatcaacactcaac
tccatcccggctaaccctcttaatctaattccgccctcaacgtcaacttctagcttcact
aaacccaccgacagtggaaattctgttcccaatacttcctttcctactccaaacccatca
ttcaattttacagcaccatcactcatccaaccctcaacttcaaatccatgggcgttaact
cagccatcaacactcactgaaactggaaagagccaaataaatccagcaccatcgactgac
aaggcggttgactgcattatagctgttaaagatcctttcgggcctcaatctgcatcctct
cactctttgatagaccatcgcatctgctctccactgattcaaaatggaatatctggcatg
cctgtgattgataaaccagcaacaaccagaatttcatctctcgttacctcaagacatatc
cctcaacgaccattgacagtgcgtgccaggaaatacaatcccaaacgtgatgggccgaag
gtcccgttctttgatcacattgatgaaacaccaggcactcaaaaggagtctacttttatt
attccaagggagaatcccaggtcggtgtttgaggctacccctaagcagtccggtgtcagc
tgtgccaaagccgacgtcactgatgcatctacttcgctacatgatcttagactcaaatct
aagacagacgaagctagcagttccacgccctgcaagttggagtgtcaaaaattagttaac
cagaaacttcaacaggccaatccatcagcatcagtgccaaagctccaacgaactgattat
tacacacagccatcaatccaggaactactatcagctgaaagcaacgacccaggtttttgc
agtcatgtacaggattttgtggtgggccgacatgggtatggagaggttaagttcaaaggg
gagacagatgtacgtgggctggaccttgatgctcttgtatccttcaataagcgggaggtc
atcgtctacgaggacgagcatgagaagcctgagattggagaaggccttaacaagcaggcc
gaggttactctcctgaacgtaaaatgcagtgacaagacaggaaaagaatataagagtggg
aagatggttgataagtttttagagaagctgaagaaagtggctgaagaccaaggagctgag
tttgtgtcctatgatgctgttaatggggtgtggaagtttcaggttcagcatttctag
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