Silene latifolia (white campion): 141592014
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Entry
141592014 CDS
T11116
Name
(RefSeq) cyclic nucleotide-gated ion channel 2-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
141592014
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
slaf04040
]
141592014
Ion channels [BR:
slaf04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
141592014
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GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
DUF3382
DM_Arn
Motif
Other DBs
NCBI-GeneID:
141592014
NCBI-ProteinID:
XP_074268655
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Position
7:complement(31810559..31815043)
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AA seq
719 aa
AA seq
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MITIFTMPSISIPRFVSISRIFQKLLGNVNETVRGSRNNEDENISSRETSYTSASIECYA
CTQAGSPVFHSTSCDRAGQPEWEALAGSSVYPLPTQTGSNSSHLRRLPRRSPVGLFGPLL
DPRSDKVRKWNRVILLARGVALAIDPVFFYALSIGRGGSCLYMDGELAAVVTLIRTCVDA
VHFWHVWLQFRLAYVSRESLVVGCGKLVWDPRAIAIHYVRSLKGFWFDLYVILPIPQVVF
WSVVPMLLRQDRIRYLMKIILLIFLFQFLPKVYHSIALMRRMQKVTGYIFGTIWWGFGLN
LIAYFIASHAVGGCWYVLAIQRVAECLAQQCRNRNCSASLSCSKGLCYQFLQQADTIEKC
ATNSTFTRKSFCLDYNGPFSYGIYSSVLPVISSNAITIKILYPISWGLYQLSTFGNNLTP
TVQWAEVLFCMCLVLGGLMLFTLLIGNIQVFLHTVMAKKRKMQLRCRDMEWWMRRRQLPS
RLRQRVHHFEHRNWFTTGGVKETELINDLPQGLRRDIKRYLCLDLIRKVPLFHCLDDLIL
DNICDRVKPLIYCSAEKILREGDPVQRMVFIVHGRIKSNQNLSKGIVATDILAPGSFLGD
ELLSWCLRRPFVHRLPASSATFVCVESTEAFGLDAYDLRYITEHFRYKFANNTLKRTLRY
YSSNWRTWAAVNIQFAWRRYRKRAKGSRTRVMSPNGDPQKRLLQFAAVFMSFKPHDHLD
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgataaccattttcaccatgccctctatttcgattcctcgctttgtctccatctccagg
atttttcagaaacttttggggaatgtgaacgaaacagtacgaggaagccggaataatgag
gatgaaaacattagtagcagagaaacatcatacacaagtgcatcaattgagtgctatgca
tgcactcaagcagggtccccagtattccactcaacaagctgtgatcgggcggggcagccc
gaatgggaggccttagcaggctcgtctgtctacccattaccaactcaaactggatccaat
tccagtcacttgaggaggcttccaagacgcagcccagtaggactctttgggcccttattg
gaccccaggagcgacaaagtcagaaagtggaacagggttatactgctggcacgtggcgtg
gcgctagccattgatcccgtcttcttctacgcgctgtctattgggcgtggagggtcgtgt
ctttacatggacggggagttggcagcggtggtcaccctcattcgcacctgtgtcgatgct
gttcacttttggcacgtatggctacaattccggctagcgtacgtgtcaagggagtcgttg
gtggttgggtgtgggaaactcgtgtgggacccgcgtgcgatagccatacattatgtacgt
tcattgaagggcttctggtttgatctttacgtcatacttcccattcctcaggtcgtattc
tggtccgttgtgcctatgttacttagacaggatcgaataaggtatctgatgaagataatc
ctgcttatatttctgtttcaattcctgccaaaagtttaccatagcattgccttaatgaga
agaatgcaaaaggtgactggctacatttttggaacaatatggtggggtttcggactcaat
ctcatcgcttactttatagcatctcatgctgttggtggatgttggtatgtccttgccata
caacgtgtagcggagtgccttgctcagcagtgtagaaaccggaattgcagtgcctcactg
tcatgctccaagggtttgtgctaccagtttttgcagcaagctgacacaatagaaaaatgt
gcaaccaactccaccttcacccgaaagtcgttttgcttggattacaatggcccttttagc
tatggaatctatagttctgttcttcctgtcatttccagtaatgccatcactatcaagatc
ctttatcctatctcatggggtttgtatcagctcagcacttttggcaataatctaactcca
acagtccaatgggcagaagtgctgttctgcatgtgcctcgttctcggtggcttaatgcta
ttcaccttattgatcggtaacatccaggtgttccttcataccgtcatggctaagaaaaga
aaaatgcagttgagatgtcgggacatggaatggtggatgaggcgtagacaattgccttct
cgtttgagacaaagagttcatcactttgaacaccgcaactggttcaccactggtggtgtt
aaggagacggagttaatcaatgacttgccacaaggacttcgacgggatataaaacgttat
ctttgccttgatctcataagaaaggttcctctatttcactgcttggatgatctgattctt
gacaacatctgtgatagagtaaaacctttgatctactgcagcgctgagaagatcctaagg
gaaggagatcctgtacaaagaatggtattcattgtccatggccgaatcaaaagcaaccaa
aatcttagcaaaggcattgttgcaaccgacattcttgcaccagggtcattcttaggtgat
gaactcctgtcttggtgcctaaggagaccattcgtgcaccgccttccagcatcctcagcg
acgtttgtttgcgttgaatcaacggaagcttttggtctcgatgcctacgacctacgttac
attactgaacatttccgatataaatttgcaaacaacaccctaaagcgaaccttgaggtac
tattcatcaaattggagaacctgggcagcagttaacatacagtttgcttggcgacgttat
aggaagagggctaaaggttcaaggactcgtgtgatgtcgcctaatggtgatccacagaaa
cggctacttcagtttgccgccgtgttcatgtctttcaagccacatgatcatctggactaa
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