Silene latifolia (white campion): 141592042
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Entry
141592042 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141592042
KO
K24752
WD repeat-containing protein 70
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141592042
03036 Chromosome and associated proteins [BR:
slaf03036
]
141592042
03400 DNA repair and recombination proteins [BR:
slaf03400
]
141592042
Ubiquitin system [BR:
slaf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
141592042
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
141592042
DNA repair and recombination proteins [BR:
slaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Others
141592042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WDR55
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_SPT8
NBCH_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
Nucleoporin_N
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
WDR54
Motif
Other DBs
NCBI-GeneID:
141592042
NCBI-ProteinID:
XP_074268697
LinkDB
All DBs
Position
7:39726555..39732720
Genome browser
AA seq
581 aa
AA seq
DB search
MEDEAENHDGIRAHFPLSFGKQSKSQTPLEVIHNTTLRSQPPNLNPNPKDTDDDLVIGPP
PPPPSADDDDDDEPLVGPPPPPRVGAEVTDDEDDDEDETPFRIPLSNEIVLKGHTKVVSA
LAVDPTGSRVLSGSYDYTVRMYDFQGMKRDLSSFRQLEPFEGHQVRALSWSPTAGFFLCV
TGSAQAKIFDRDGLTIGEFVKGDMYIRDLKNTKGHITGLTCGEWHPNKKETILTSSEDGS
LRIWDVNDFNSQKQVIKPKLARPGRVSVTTCTWQREGKSIAGGIGDGSIQIWNIKAGWGS
RPDIHLQSAHTDDITALKFSNDGRHLISRSFDCTLKVWDLRQTKQSLKVFEDLPNNYAQT
NIAFSPEEDLILTGTSVERDSAVGGLLCFYDREKLELVSRVGISPTRSVVQCAWHSKLNQ
VFATVGDKHQGGTHILYDPTMSERGALVCVARAPRTKSVDDFEVQPVIHNPHALPLFRDQ
PSRKRQRDKILKDPMKSHKPELPMTGPGCGGRTGTSSGSLLTQYLLKKGGMLKETWMDED
PREAILKHAEAAEKDPKFIAPAYAETQPQTVFADSDSEEEK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaagcagaaaaccatgacggaatacgagctcatttccctttatcattcggc
aaacaatccaaatcccaaaccccactcgaagttattcacaacactactcttcgttcccaa
ccccctaatcttaaccctaaccctaaagatactgatgatgatcttgttatcggaccgccg
ccgccgcctccatcggcggacgatgacgacgatgatgagcccctggttggaccgccaccg
ccgccgcgtgtgggagctgaggtgactgatgatgaggacgatgacgaggatgagactccg
tttcgaattcctttgagcaatgagattgttttgaagggacatactaaggttgtttcggct
ttagcagttgatcccacagggtcaagagttctttctggtagttatgactatactgttcga
atgtatgattttcaaggaatgaaacgagatttgtcttcatttagacaattagagcctttt
gaagggcaccaagttcgggctcttagttggagtcctacggctgggttctttttgtgcgtc
actggctccgctcaagctaagatttttgatcgtgatggcctcaccattggcgagtttgtg
aagggggatatgtatattcgtgatttaaagaacacaaagggtcacataactggtttgact
tgtggagagtggcacccaaataaaaaggagaccatcttgacgtcatctgaagatggttca
cttcggatttgggatgtaaatgacttcaatagccaaaaacaggtaataaagccaaagctt
gcgaggcccggaagagtttcagtcacaacatgcacttggcaacgtgaaggaaaaagcatt
gctggtggaattggagacggatctatccagatctggaatattaaggcaggatggggaagc
agaccggatattcatctacaaagtgcacatactgatgatatcactgctttgaagttttca
aatgatggacggcatctgatatcaagaagttttgactgcacattgaaggtttgggatttg
cgccaaacgaagcagtcacttaaggtgtttgaagatctaccaaacaattatgctcaaaca
aatattgcatttagtcctgaggaagatctgatattgactggtacttcggttgaaagagat
agcgcagttggtggtttgttgtgcttctatgatcgggaaaaacttgaactagtatcaagg
gttggcatctctccaacacgcagtgtcgtgcagtgcgcttggcattcaaaactaaatcag
gtttttgctactgtcggagataaacaccaaggaggaacacacatactgtatgatccaacc
atgagcgagcgaggggctcttgtttgcgttgctcgggcaccaaggacaaagtcggtcgat
gactttgaggtgcagccagttatacacaacccacatgcgctccccttgtttagagatcag
ccaagtcgcaaacggcaaagggataagatactgaaggaccctatgaaatcccacaagcct
gaacttcccatgactggacctggctgtggtggcagaactggcacctcttccggaagcttg
ttaactcaatatcttctcaagaaaggaggtatgttgaaggagacatggatggacgaagat
ccaagagaagctatactgaagcatgctgaggcggcagagaaggatcctaagttcattgcg
cccgcttatgctgagacccagcctcaaactgtctttgccgattctgattctgaggaggaa
aagtaa
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