Silene latifolia (white campion): 141592061
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Entry
141592061 CDS
T11116
Name
(RefSeq) putative pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00040
Pentose and glucuronate interconversions
slaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
141592061
Enzymes [BR:
slaf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
141592061
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
141592061
NCBI-ProteinID:
XP_074268725
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Position
7:complement(41038796..41043495)
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AA seq
394 aa
AA seq
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MGNSHRKYRQQHNQQHNQPGPYPHYPPPPPPPINPPYYYPTPFPPPPPPQQFRQPQPSTM
EFSLPYTRVDDSLRALSAQAEGFGRFAIGGVNGPLYRVTSLLDDGPGSLRDACRKKEPLW
IVFEVSGTIQLNSYLNVSSYKTIDGRGQRIKFTDKGLRLKECEHVIICNLEFEGGRGHDV
DGIQIKPNSKHIWIDRCTLSDYDDGLIDITRASTDITISRCRFSQHDKTMLIGADPTHVN
DRCIRVTIHHCFFNGTRQRHPRVRYGKVHLYNNYTRDWGIYAVCASVESQIYSQNNIYEA
GQKKVAFMHYTEKAADKESEATGHIKSEGDIFINGGESGARPLASEDCVFHPSEFYDTWT
MAPPSESLKHFLQHCTGWQNIPRPPEVLTEAQPQ
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgggtaactcccatcgtaaatacagacaacaacataatcaacaacataatcaacctggg
ccataccctcattatcctcctcctcctcctcctcctataaatccgccatattattatccc
accccttttcctcctcctccccctcctcagcaattccgacaaccgcagccatctacaatg
gagttttctctgccgtacacgcgcgttgatgattccctacgcgctctttccgctcaagct
gagggtttcggccgttttgctattggtggcgttaatggtcctctttatcgtgttacctct
cttttagatgatggacccggatctcttagagacgcctgtcgtaaaaaggaacccctttgg
attgtctttgaagtttcaggcacaattcaactcaactcttatctaaatgtgtcttcttat
aagacgattgatggccgtgggcagagaatcaagttcacagataaagggttaaggctcaag
gagtgtgagcatgttattatctgcaatctagagtttgagggtggcaggggtcacgatgta
gatggaattcagattaaacctaactctaagcatatatggattgatcgctgcaccttgagt
gattatgacgatggacttatcgatatcactagagcaagtacagatatcactatatctagg
tgtcgtttctctcaacatgacaaaacaatgctaattggagctgatccaactcatgtcaat
gatagatgcattcgagtgaccattcaccattgtttctttaatggcacccggcagaggcat
cctcgtgtcagatatggaaaggttcatttatataataactacaccagagattgggggatc
tatgctgtttgtgccagcgttgagtcacagatatactctcagaataatatttatgaagct
gggcagaagaaagtggcttttatgcactacacagagaaggctgccgacaaggaaagtgaa
gcaacgggccacataaaatccgaaggggacatattcatcaatggaggtgaatcaggagct
cgacctttggcaagtgaagattgtgtgtttcatcctagcgagttctatgatacatggaca
atggcaccaccttctgaatcccttaaacattttctgcagcattgtaccggttggcagaac
attcctcgcccacctgaagtactaactgaagctcagccgcagtaa
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