Silene latifolia (white campion): 141592155
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Entry
141592155 CDS
T11116
Name
(RefSeq) cell division control protein 48 homolog A-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
141592155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141592155
03009 Ribosome biogenesis [BR:
slaf03009
]
141592155
04131 Membrane trafficking [BR:
slaf04131
]
141592155
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slaf04147
]
141592155
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
141592155
Ribosome biogenesis [BR:
slaf03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
141592155
Membrane trafficking [BR:
slaf04131
]
SNARE
SNARE associated proteins
Others
141592155
Autophagy
Aggrephagy
Other aggrephagy associated proteins
141592155
Exosome [BR:
slaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141592155
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_2
AAA_16
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
AAA_17
RNA_helicase
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
Viral_helicase1
Parvo_NS1
nSTAND_NTPase5
AAA_18
AAA_lid_PRS2_C
ABC_tran
NB-ARC
Vps4_C
AAA_7
NACHT
TsaE
IstB_IS21
DUF815
Zeta_toxin
AAA_24
ResIII
Motif
Other DBs
NCBI-GeneID:
141592155
NCBI-ProteinID:
XP_074268838
LinkDB
All DBs
Position
7:52996891..53002913
Genome browser
AA seq
807 aa
AA seq
DB search
MADNPAESSDSKGTKRDFSTAILERKKAANRLVVDEAVNDDNSVVSLHPDTMEKLQIFRG
DTILIKGKKRKDTICIALADETCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRV
HILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYC
VVAPDTEIFCEGEPVKREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV
KPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKMAGESESNLRKAFEEAEK
NAPSIIFIDEIDSIAPKRDKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDP
ALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLSEDVDLEKVSKETHGYVGADLAALC
TEAALQCIREKMDVIDLEDDTIDAEILNSMAVTNEHFQTALGQSNPSALRETVVEVPNVS
WADIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISVKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIATQRGSSVGDAGG
AADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDDESRLQ
IFKAALRKSPIAKDVDLGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERRRSE
NPEAMEEDVEDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFS
NTSAGGTTTSDAFTVPAGAADEDDLYN
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaatcctgctgaatcctctgattcgaaggggactaagagagactttagtact
gcgattctagagcgaaagaaagccgccaatcgccttgttgttgatgaggctgttaatgac
gacaattctgttgtttctctccatcctgataccatggaaaagcttcagattttccgtggc
gataccatcttgattaagggaaagaaaaggaaagatactatttgcattgcacttgctgat
gagacatgtgaagaacctaaaattaggatgaacaaggttgtgaggtcaaacttaagggtt
agactcggggatgtggtatctgtacaccagtgccctgatgtcaaatatggaaaacgtgtt
cacattcttcctgttgatgatacagtggaaggagtgaccggaaatctttttgatgcctac
ttgaaaccttactttctagaagcttaccgtcctgtgcggaaaggtgatttgttcctggtc
agagggggcatgagaagtgttgagttcaaagtcattgaaactgaccctgctgagtattgt
gttgttgcccctgataccgagatcttctgtgagggggaacctgttaaaagagaagatgag
aatagactggacgaggttggttacgatgatgttgggggagtacgtaagcaaatggcgcaa
attagggagcttgttgaattgccactccgacacccacaactctttaaatcaattggtgtg
aagccaccaaagggaattttgctctatgggcctccaggttcagggaagacattgatagct
cgtgctgttgctaatgaaactggtgctttcttcttttgtatcaatggacccgagataatg
tcaaaaatggccggagaaagtgaaagtaatctcaggaaagcattcgaggaggcagagaag
aatgctccttcaattatctttattgatgagattgattcaattgctcctaaaagagacaag
actaatggcgaggttgagaggagaattgtttcccagcttcttacccttatggacggactc
aagtcacgtgctcacgttattgtcatgggggctactaatcgtccgaatagcattgatcct
gctttgagaaggtttggtcgatttgacagggaaattgatatcggtgttcctgatgaaatt
ggacgacttgaagttcttcgtattcacacaaagaacatgaagctttctgaagatgttgat
ctggaaaaagtctctaaggaaacacatggctatgttggtgctgacttggctgctttatgt
actgaagctgctctacaatgtatcagagaaaagatggacgtgattgatttggaggatgac
acaatcgatgcagaaattcttaattccatggctgtcacaaatgagcatttccagactgct
cttggacagagcaatccgtctgctttacgtgaaacagtcgttgaagttcctaatgttagt
tgggcagatattggtggccttgaaaatgttaagagagagctccaagagacggttcaatat
ccagtggaacatccagagaaatttgagaaattcggaatgtcaccttcaaagggagtcctt
ttctatggtcctcctggatgtggaaagactttgctagccaaggctattgcaaacgagtgc
caggccaactttataagtgtgaaaggtcctgaattgctcaccatgtggtttggtgagagt
gaggctaacgtccgtgagatttttgacaaggctcgccaagcagctccttgtgtgctgttc
tttgatgagctcgattcaattgcaacgcagagaggaagcagtgttggagatgccgggggt
gctgctgacagagttttgaaccaacttctcactgaaatggatggcatgtctgctaagaag
actgttttcataatcggagctactaacagacctgatatcattgatccggctcttctgcga
ccaggtcgtcttgaccagttaatttatatcccactcccagatgatgaatcacgcctccaa
atttttaaagcagccttgagaaagtcccctattgcgaaagatgttgatcttggggctctt
gcgaagtatactcagggctttagtggtgcagatatcactgaaatatgccagcgtgcatgc
aagtatgccatccgtgaaaacattgaaaaggatatagagaaggagagaagaagaagtgag
aatcccgaggcaatggaggaggatgtcgaagatgaagtggctgaaattaaggcggcccac
tttgaagaatctatgaagtatgctcgaaggagtgtgagcgatgctgatattcgcaaatat
caggcatttgctcagacattacagcagtccagaggcttcggatcagaattccgcttctcc
aacacaagtgcaggcggtaccacaacatcagacgcttttactgtcccagctggtgcagcc
gatgaagatgatctttataattag
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