Silene latifolia (white campion): 141592421
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Entry
141592421 CDS
T11116
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141592421
Enzymes [BR:
slaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141592421
Ubiquitin system [BR:
slaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141592421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
Prok-RING_4
AF_0924
zf-RING-like
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
141592421
NCBI-ProteinID:
XP_074269190
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All DBs
Position
7:101654290..101659399
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AA seq
446 aa
AA seq
DB search
MGIGVIRIILLFKLCLIMVIRLSYALVVLEGGDFQHTFEDIEASLAPPVKSGGVSGKLLI
ADPLDACSPLTNKFDHGGNHTSMFALIIRGGCSFEQKIRKAQMAGFKAAIVYDNEVGGSL
VAMAGNSAGIKIHAIFVSKPTGETLKTFAGRDVKVWIIHSYDSSAWSIMAISFISLLAMS
AVLATCFFVRRHRVRRERPQTRVREYHGMSGRLVKAMPSLVFTTVTEEYCTSSTCAICLE
DYIVGDRLRLLPCRHKFHAICVDSWLTSWRTFCPVCKRDARTSNGEPPASESTPLLSSNP
SSIASSPSSSFMSRSSAIQIASPSPQSHLLSRNHSILSSPQIPRPLRSPYRHQHSPSMSL
SRSSMDLRNMSSQRSLASQLMSPHSIGYPSTSPYHSRYMSPYVPSPSNASSSYLGSSLRQ
PNALHYSESATSFSPYTSAQSLPGCD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgggtattggagtaattagaataattttgttatttaaattatgtttgatcatggtgatt
agattgtcttatgctcttgtagtattggaaggtggtgattttcaacacacttttgaagac
attgaagctagccttgcaccgcctgtgaaaagtggtggtgtatcagggaaactgttaata
gctgaccctcttgatgcatgttctccattgacaaacaagtttgatcatggtggtaatcat
acttctatgttcgcgttaataattagaggtgggtgtagctttgagcagaaaattaggaag
gcgcagatggcagggtttaaagccgccattgtctatgataatgaagtcggtggctctttg
gttgcaatggcaggaaattccgctggcataaagatccatgccatatttgtttctaaacca
actggagaaaccttaaagacttttgcggggcgtgatgtcaaagtgtggataatccatagt
tatgacagttctgcatggtcgataatggcaatttccttcatatctctactagcgatgtct
gcagtgctggctacttgtttctttgttaggcgtcaccgtgtaagacgagagagacctcaa
acccgcgttcgagaatatcatggaatgagtggtcgtttggtcaaagctatgcctagcttg
gtattcacaactgtaactgaggaatattgtacatcatcaacatgtgccatatgtcttgaa
gattacattgttggggataggcttcggcttttaccgtgccgtcataaatttcatgcaatt
tgtgttgactcttggctgacttcgtggagaacattttgcccagtttgcaaacgcgatgca
aggactagcaatggtgaacctccagcttccgaatctacaccattgttatcatcaaacccg
tcatctattgcttcttcaccatcctcttcatttatgtcgcgctcctctgctatacaaata
gcttcaccaagtccgcaatcccatctactttcccgtaatcattcaatcttgagcagtcct
cagattcctcgtccattacggagcccatatcgccatcaacattccccttcaatgagcttg
agccgaagctcaatggatcttcgaaatatgtcttctcaaagatcactagcttctcagttg
atgtctcctcattctatcggttacccgtctacgtcaccttaccacagtcgatacatgtca
ccgtatgttccaagtccaagtaatgcttcatcgagttatcttgggtcttctctacgacag
ccaaatgcattgcattatagcgagtctgcaacaagtttctctccgtatacttctgcacaa
tcgcttcctggttgtgattga
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