Silene latifolia (white campion): 141592568
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Entry
141592568 CDS
T11116
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03082
ATP-dependent chromatin remodeling
slaf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141592568
03083 Polycomb repressive complex
141592568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slaf03036
]
141592568
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
141592568
Histone modification proteins
HAT complexes
HATB complex
141592568
HDAC complexes
Sin3A-HDAC complex
141592568
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
141592568
PRC2.2
141592568
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
141592568
Heterochromatin formation proteins
Other heterochromatin formation proteins
141592568
Chromatin remodeling factors
NuRD complex
141592568
NuRF complex
141592568
NuRF complex (fruit fly)
141592568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_DCAF12
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Beta-prop_IP5PC_F
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
141592568
NCBI-ProteinID:
XP_074269401
LinkDB
All DBs
Position
7:113101955..113110500
Genome browser
AA seq
456 aa
AA seq
DB search
MRGKQQKSVVDEKYAQWKSLVPVLYDWLANHNLVWPSLSCRWGPQIEQATYKSRQRLYLS
EQTDGSVPNTLVIANCEIVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIREMP
QHNHIVATHTDSPDVLIWDVEAQPNRHAVLGATLSRPDLVLTGHKENAEFALAMCPKEPY
VLSGGKDRSVVLWSIQDHITTTASDPSANKPAGPGTTIVKQNGESPSVAPRGIFEGHDDT
VEDVQFCPKSSQEFCSVGDDSCLILWDARSGSKPVIKVEKAHDADLHCVDWNPFDENYIL
TGSADSSIRMFDRRSLSSDGVGSPVHKFEGHKAAVLCVQWSPDNPSVFGSAAEDGVLNIW
DYEKVGKKKERAARTPNAPPGLFFQHAGHRDKVVDFHWNTYDPWTIVSVSDDCDSSGGGG
TLQIWRMSDLIYRPEDEVLAELEQFKSHVAACASKS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaaaacagcagaaatcagttgtagacgagaagtacgcgcagtggaaatcactt
gttcctgttctttatgattggttggctaatcataaccttgtttggccttctctctcttgc
cggtggggcccacagattgagcaggcaacatacaagagtcggcagcgtctttacctctct
gagcagactgatggcagtgtgccaaatacactggtgatagcgaactgtgaaattgtcaag
ccaagagttgctgctgcagaacatatctcgcagttcaatgaagaagcacgttcaccgttt
gtgaagaagtacaagaccatcatacatcctggagaggtaaaccgaatcagagaaatgcct
cagcataaccatatagttgctactcatactgatagtcctgatgttttgatttgggacgtc
gaagctcaaccaaaccgtcatgccgtgttaggtgctacactctctcgtccagatttggtg
ttgactggacataaagaaaatgccgagtttgctcttgcaatgtgtcctaaggaaccttat
gtcctttctggaggaaaggacaggtctgttgtattgtggagtattcaggatcacataaca
acaacagcctcagacccatctgccaacaagcctgcaggaccaggaaccactatagtcaaa
caaaatggagagagcccttctgtggcacctcgaggtatctttgagggtcatgatgatact
gtggaagatgtgcaattttgtccaaaaagttcacaggagttctgcagtgttggagatgat
tcttgcctcatattgtgggacgctcgaagtggttctaagcctgtcattaaggtagagaaa
gctcatgatgctgatcttcactgtgtcgactggaatccctttgatgaaaattatatcctc
acaggatctgctgatagctctattcgtatgtttgaccgaaggagtctttcttctgatgga
gttgggtcccctgttcacaaatttgaggggcataaagcagctgttctttgtgttcagtgg
tctcctgacaatccaagtgtttttggaagtgctgcagaggatggtgttttgaatatttgg
gactatgaaaaggttggcaaaaagaaagagcgtgcggcaagaacacctaatgctcctcca
ggcctcttttttcagcatgctggacacagggataaagttgttgattttcattggaacaca
tatgatccatggacaattgttagtgtttcggatgattgtgattcaagtggcggtggtgga
acattacagatctggcggatgagtgatctgatataccgcccggaagacgaggttttggca
gagcttgaacaattcaagtcccatgtggcggcatgtgcctccaaatcatga
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