Silene latifolia (white campion): 141592691
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Entry
141592691 CDS
T11116
Name
(RefSeq) protein argonaute 1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141592691
03036 Chromosome and associated proteins [BR:
slaf03036
]
141592691
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
141592691
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
141592691
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
141592691
microRNA pathway
RISC loading complex
141592691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
Gly-rich_Ago1
ArgoMid
Piwi_N
Motif
Other DBs
NCBI-GeneID:
141592691
NCBI-ProteinID:
XP_074269555
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All DBs
Position
7:complement(117193476..117203220)
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AA seq
1150 aa
AA seq
DB search
MVRKKRTDQSAVGESSNPQQAGGSAGRGGGGQPMPPQAVGGTGGRGGGGQPMHPQQSASG
GRGGGQPPQQAGGRGGGGPQMPPQQAGGRGQQMPPQQAGGRGGGGQQMPPQQAGGRGGGG
QPMPPQQAVGGQQGGGRGMAPQGPQGGRGGRGSGQRGGMVPQQYGGPPPEFQGRGGGQPQ
GRGGSSAGGGRGGGPMGGPFRPLVPEQHQASQAPFQPGGMPPQAMTVPPAELAEASSPVP
PVQAGPSQVQQQLQQLSVQEGSSSQAIQPLPVSSKAVRFPLRPGKGSTGTRCIVKANHFF
AQLPDKDLHQYDVSITPEVTSRGVNRAVMGQLVKLYRESHLGKRLPAYDGRKSLYTAGPL
PFTIKEFKITLVDEDDGSGAPRRERDFKVVIKLAARVDLHHLGMFLQGRQADAPQEALQV
LDIVLRELPTTRFSPVGRSFYSPHLGRREPLGDGLESWRGFYQSIRPTQMGLSLNIDMSS
TAFIEPLPVIDFVTQLLNRDVTSRPLSDSDRVKIKKALRGVKVEVTHRGNMRRKYRISGL
TSQATRELTFPVDESGTMKSVVQYFYETYGFNIQHTQWPCLQVGNQQRPNYLPMEVCKIV
EGQRYSKRLNERQITALLKVTCQRPQERERDIVQTVHHNAYHADPYAQEFGIKIDERLAS
VEARVLPAPWLKYHDTGREKNVLPQVGQWNMMNKKMVNGGKVNNWICINFSRNVQDNIAR
SFCAELAQMCQISGMVFNPDPVLQVLSARPDQVEKALKTRYHDAMTKLQQRELDLLVVIL
PDNNGSLYGDIKRICETELGIVSQCCLTKHVFKMSKQYLANVSLKINVKVGGRNTVLVDA
ISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQE
LIQDLYKSWEDPNRGQVSGGMIKELLISFRRSTGHKPQRIIFYRDGVSEGQFYQVLFYEL
DAIRKACAALEPNYQPPVTFVVVQKRHHTRLFANNHRDRNSVDRSGNILPGTVVDSKICH
PTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQSLTNNLCYTYARCTRSVSIVPP
AYYAHLAAFRARFYMEPETSDSGSMMSGAVSGRGGMSAAGGRSTRAPPPNAAVRPLPALK
ESVKKVMFYC
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagaagagaactgatcaatctgcggtaggagagagttctaatcctcagcaa
gctgggggtagtgctggaagaggtggcggtggtcaaccaatgccaccgcaagctgttgga
ggtactggtgggagaggtggtggcggtcagcctatgcatccacaacaatctgctagtggt
gggagaggtggtggtcagcctccacaacaagccggtgggagaggtggcggcggcccacaa
atgcctccacaacaagctggtgggagaggccagcaaatgcctccgcaacaagctggtggg
agaggtggtggtggccagcaaatgcctccacaacaagctggtgggagaggtggcggcggc
caaccaatgcctccacaacaagctgttgggggtcaacaaggcggaggaagaggaatggct
ccccagggtcctcaaggaggccgtggaggacgtgggagtggccagcgtggtggcatggtg
cctcagcagtatggtggacctccgccagagttccaaggtagaggtggtggtcagcctcag
ggccgtggcggtagcagcgctggtggcggccgtggtggtggtcctatgggcgggccattc
cgtcctctagttcccgagcagcaccaagcttcccaggctccctttcaacctggggggatg
ccgcctcaagcaatgactgtgccacctgctgaactggctgaggccagttctcctgtgcca
cctgtgcaggctggcccttcacaggttcagcagcagttgcagcaactgtctgtccaagaa
ggctcatcttctcaggctattcagcctttgcctgtcagtagcaaagcagtgaggttccct
ctccgacctgggaagggtagcactggaacccgatgtatcgtgaaagcaaatcactttttt
gctcagttacccgataaggatttgcaccaatatgatgtttcaattacgccagaggtgaca
tcacggggtgtcaatcgcgctgtcatggggcaattggtgaagctctacagagaatctcat
cttgggaagagactccctgcatatgatggaagaaaaagtctttatacagctggtccactt
ccatttactattaaagagttcaagataacccttgttgatgaggacgacgggtccggggca
ccaagacgagaaagagatttcaaggttgtgatcaaacttgctgcacgagtggatctgcat
catctaggcatgttcttacaaggtcgtcaggcagatgcacctcaagaagctcttcaagtg
cttgatatagtattgcgtgaattgcccactactcgtttctcaccagttggccgctcattc
tattcacctcatcttgggcgaagggagccactaggagatggtctggagagctggcgtgga
ttctatcagagtattcgaccaacccaaatggggttatctctgaacattgatatgtcttcc
acggctttcattgagccattgccggtcatcgactttgttactcaactgcttaatagggat
gtgacttccagacctttatctgattctgaccgagtgaagattaagaaggctttaagaggg
gttaaagttgaagtcacacaccggggaaacatgcgcagaaaatacaggatttctgggtta
acatcacaagctactagggagcttactttccctgttgatgaaagtggcactatgaagtct
gttgtgcagtacttttatgagacctacggttttaacattcaacacacacagtggccatgt
ctacaagttggaaaccaacaaagaccaaattatttgcctatggaggtgtgcaaaattgtt
gagggacaaagatactccaaaagattgaatgaacggcaaattactgccttactgaaggtc
acttgtcagcgtccccaagaaagagagcgagatattgtgcagactgtgcatcataatgca
tatcatgctgatccatatgctcaagagttcggtattaaaatcgatgagaggcttgctagt
gttgaagcacgtgtactacctgcaccatggctgaaatatcatgatactggtagggagaag
aacgtcctgccccaagttggtcaatggaatatgatgaataagaaaatggtcaatggaggg
aaagttaacaactggatatgcattaacttttcacgtaatgtgcaagataatattgctcgc
agtttctgcgctgagcttgcacaaatgtgtcaaatatctggcatggtattcaatcctgac
ccggttcttcaagtcctctctgctcgtccagatcaggtggagaaggctctaaaaacccgt
tatcatgatgctatgaccaaattgcagcaaagggagcttgatctgcttgttgtgattctt
cctgataacaatggctctctctatggtgacatcaaaagaatttgtgaaacagaacttggg
attgtctcgcaatgctgcttgacaaaacatgtttttaagatgagcaagcaatatcttgca
aatgtttctttgaagataaatgtgaaagtgggtggaaggaatacagtgcttgttgatgca
atatcgaggcggattcctctggttagcgataggccaactattatctttggtgcagatgtt
acccatcctcatccgggagaagattctagtccatccattgctgctgtggttgcttctcaa
gactggcctgaagttactaagtatgctggtttggtttgtgctcaagcacatcgtcaggaa
ttgatccaagatctatataaatcttgggaagatcctaacaggggccaagtttctggagga
atgatcaaggaactccttatatctttccgtaggtctaccggtcataagccacaacgtata
atattttacagggatggcgtaagtgaaggccaattttatcaagtgctgttttatgaactc
gatgctataaggaaggcctgtgctgcattggagccaaactatcaaccacctgtgacattc
gtcgtggttcagaaacgacaccacacaagactctttgccaacaaccatagggatcgtaat
tctgttgataggagtggaaatatattgcctggtactgtggttgattccaagatttgccac
cctaccgaatttgacttttatctctgcagtcatgctggcattcagggcactagcagacca
gctcattaccatgttttgtgggatgagaacaagtttactgctgatgagttgcagtccctt
accaataacctttgttatacctatgctaggtgtactcgttctgtgtcaatcgttccacca
gcatattatgcccatctagctgctttccgtgcccgattctacatggagcctgaaacatcc
gacagtggctcaatgatgagcggtgctgttagtggccgtggaggtatgtcggcagctggt
ggacgtagtaccagggcacctcctcctaatgctgctgttcgccctcttccagctttgaaa
gagagtgtgaagaaagtcatgttttactgttga
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